Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04929 ATGGATCGATTATCATCGGAGAAGCTCATACTCGTCAACCGTGAACCAAACGGAATCGCGGTGGTGACTATTAACCGTCCCGATTCTCTTAACTCATTAACTCGGGCTATGAATGTGGACCTGGCTCAGGCTTTCAAGAGCCTCGACTGGGACGAATCGGTGCGGGTGATTATATTGACCGGATCAGGTCGGTCGTTTTGTTCCGGCGTTGATCTCACGGCGGCGGAGGATGTTTTCAAAGGTGATGTTAAAGATCCTGAGAGTGATCCCGTGGTGCAAATGGAACGATGCCGGAAACCGATAATCGGAGCTATCAAAGGATTTGCTGTTACCGCTGGATTTGAGATTGCACTCGCTTGTGATATCTTGGTTGCTGCCAAAGGAGCCAAATTCATGGACACTCATGCTAGATTTGGGATATTTCCTTCGTGGGGTTTATCTCAGAAGCTTTCGCGCATTATAGGAGTAAATAAAGCACGTGAGGTATCTCTTACGGCCACACCTTTGACTGCAGAGGTAGCTGAAAAGTTGGGTTTTGTGAACCATCTTGTTGAAGACGGTGAACTGATGAAGAAAACCAGAGAAATTGCGGAAGCCATTGTGAAAAACAATCAAGACATGGTGATGAGGTACAAGTCGGTGATAAATGATGGCATCAAGCTGGATCTTGGCCATGCTCTTTCCCTTGAAAAGGAGAGGGCCCATGATTATTATAATGGAATGACGAAGGAGCAATTCAAGAAAATGCAGGAATTCATAGCAGGAAGAAGTTCCAAGAAACAGTCGAAACTATAG 795 0.4579 MDRLSSEKLILVNREPNGIAVVTINRPDSLNSLTRAMNVDLAQAFKSLDWDESVRVIILTGSGRSFCSGVDLTAAEDVFKGDVKDPESDPVVQMERCRKPIIGAIKGFAVTAGFEIALACDILVAAKGAKFMDTHARFGIFPSWGLSQKLSRIIGVNKAREVSLTATPLTAEVAEKLGFVNHLVEDGELMKKTREIAEAIVKNNQDMVMRYKSVINDGIKLDLGHALSLEKERAHDYYNGMTKEQFKKMQEFIAGRSSKKQSKL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04929 264 FunFam probable enoyl-CoA hydratase 1, peroxisomal 7 238 - -
Trre15g04929 264 SUPERFAMILY ClpP/crotonase 7 257 IPR029045 -
Trre15g04929 264 PANTHER ENOYL-COA HYDRATASE 6 263 - -
Trre15g04929 264 CDD crotonase-like 10 200 - -
Trre15g04929 264 Pfam Enoyl-CoA hydratase/isomerase 15 252 IPR001753 -
Trre15g04929 264 Gene3D - 3 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04929 Trre-Chr15 59323935 59325781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04929 18 226 Acyl Lipid Metabolism Gene Families AT1G60550 35.321 3.13e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04929 K01692 - gmx:100170725 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04929 15 59323935 59325781 Trre15g04929 15 59323935 59325781 ECH