Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04913 ATGCAGGAAATGGCAAAAGTTGATGAGGAGAAGAAAATCGGTATGACTGAAGCTTGGTTGAGGAAACACCGTCCTGTCTACAACGCTGCCACTAAACACCCTTTTATTCGTTCCATTCGTGACGGCACTGTCCAAATTCATTCCTTCAAAACATGGCTCGCACAGGATTACTTGTTTGTTAGAGAATTTGTCCCATTTGTTGCAAGTGTGCTCACAAAAGCTTGTAAGGAATCATATGACAATGATGACGTGGAAGTTATATTAGGTGGCATGGCTTCTCTCAAGGATGAAATTTCATGGTTCAAGAGAGAAGCCAACAAATGGGGTATTTCACTCTCAGAGGTTATTCCTCAAACACCAAACAAAAACTATTGTCGGTTGCTGGAAAGTTTGAAGAGTCCAGAAGTGGATTATACTGTGGCTCTTACTGCATTTTGGGCAATTGAAGTTGTGTATCAAGAGAGTTTTGCATATTGTATTGAGGAAGGCTCAAAAACACCACCAGAATTGAAGGAGACTTGTGAAAGATGGGGGAATGAGGGGTTTGGTGAGTACTGCAAATCTCTGCAAAAGTTAGTTGATCAGCGGTTGCAGAAGGCTTCTGATGATGAAGTCAAAAAGGCTGAAGTTATGTTGCTGAGTATTATTGAACATGAAATTGAATTCTGGAATATGAGCCGTGGAAATTAA 690 0.4072 MQEMAKVDEEKKIGMTEAWLRKHRPVYNAATKHPFIRSIRDGTVQIHSFKTWLAQDYLFVREFVPFVASVLTKACKESYDNDDVEVILGGMASLKDEISWFKREANKWGISLSEVIPQTPNKNYCRLLESLKSPEVDYTVALTAFWAIEVVYQESFAYCIEEGSKTPPELKETCERWGNEGFGEYCKSLQKLVDQRLQKASDDEVKKAEVMLLSIIEHEIEFWNMSRGN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04913 229 CDD TenA_E_At3g16990-like 16 225 - -
Trre15g04913 229 PANTHER BIFUNCTIONAL TH2 PROTEIN 2 226 - -
Trre15g04913 229 PIRSF Pet18p 4 228 IPR026285 -
Trre15g04913 229 FunFam Bifunctional TENA-E protein 11 228 - -
Trre15g04913 229 Pfam TENA/THI-4/PQQC family 21 228 IPR004305 -
Trre15g04913 229 Gene3D - 10 228 IPR016084 -
Trre15g04913 229 SUPERFAMILY Heme oxygenase-like 30 226 IPR016084 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04913 Trre-Chr15 59229013 59230246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04913 K20896 - gmx:547557 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04913 15 59229013 59230246 Trre15g04913 15 59229013 59230246 ECH