Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04908 ATGTCAAGTAAGAAGGAAGAGAAAGCTCAGGTTGCAGCTGATAGAATCAAAGCTGCAGCATTAACTGCTGCTAAAGGGCTTAGTCGTGCTCAGGCAGAAAGGGCAGCAACTGCGGCTGCCCGAAATGTGAATGCTTATGGTCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGAGAAGCTAAGAGACAGATGTATTTGATGAGTACTGAGAAAGCTGTTAGATTGGGTGAAAGGAAGGATACTAAGCCTACCATGCCAACCATTGGTGGCAATGTACAGTGCCAAAAGTGTTTCCAGAGTGGCCATTGGACATATGAATGCAAGAATGAACGGGTTTACATTTCACGCCCGTCTCGGACTCAGCAACTTAAAAACCCTAAATTGAGGCCGGAAGTGTCTGTGGGTTATGATTTGGATGATAATAATAATAATAATAATGATGATGCTAAAGAGGAAAAGGCTAAAGTGAGTTCGAAAAAGTCCAAGAGGAAACATCGTTCTGGTAGTGACAGTGAGGATTCAGTGTTTGAGACTGATAGTGACAGTGGATCATCATCTGTAACTGGATCAGATTATTCTTCTGATAGTAGTTCAGGCTCAAGCTCATCATCTGATTCAGAGGAAGAAAGGAGACGTAGGAAGAAAAAGAGTCAGAAGAAGAAGCAGACTAAGAAGAAGAGCAAAGGAAAAAGCAGGAGGTACAGTACATCGTCTGAATCATCCGATTCAGATTCTGGTTCAGACTCTGATTCTGATGATAAAAGCAGCCGGAGGAAGAAGAGGCATAGTCGAAGACGTTGA 807 0.4325 MSSKKEEKAQVAADRIKAAALTAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDTKPTMPTIGGNVQCQKCFQSGHWTYECKNERVYISRPSRTQQLKNPKLRPEVSVGYDLDDNNNNNNDDAKEEKAKVSSKKSKRKHRSGSDSEDSVFETDSDSGSSSVTGSDYSSDSSSGSSSSSDSEEERRRRKKKSQKKKQTKKKSKGKSRRYSTSSESSDSDSGSDSDSDDKSSRRKKRHSRRR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04908 268 MobiDBLite consensus disorder prediction 180 205 - -
Trre15g04908 268 MobiDBLite consensus disorder prediction 215 233 - -
Trre15g04908 268 MobiDBLite consensus disorder prediction 120 268 - -
Trre15g04908 268 Coils Coil 208 228 - -
Trre15g04908 268 PANTHER ZCCHC10 PROTEIN 27 245 IPR039715 -
Trre15g04908 268 Pfam Zinc knuckle 92 128 - -
Trre15g04908 268 SUPERFAMILY Retrovirus zinc finger-like domains 91 112 IPR036875 GO:0003676|GO:0008270
Trre15g04908 268 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04908 Trre-Chr15 59213618 59214424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04908 - - psat:127073204 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04908 15 59213618 59214424 Trre15g04908 15 59213618 59214424 ECH