Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04886 ATGTCGGCCACCGGTGGCGCTGCCATCGCCGGAGGAAGCCGCAACCGTAATCGACATCTCGGTGAAAATCGTTTCTATAGTCCACCACCGCTTCGAAAACACAGAGAAAAACAAGAACAACAAAGGTCTTCGCTTTCTAGAACTTCGTCGGAGAATAGACCTGGTTCTTCTTCCGATTGCTCGATTTCTTCTCGTGCCACATCTGATATCTCTAATTTAGATCGGTTTTTGGAGTATATTACGCCACATGTTCCTGCACAATATCTTCCCAAGACAAGTTCAAGGAGATGGAAAACTAAGGAGGCTGAATTACTTCCTTACTATGTACTTGGAGACTTATGGGAATCATTTAAGGAATGGAGTGCATATGGGGCAGGTGTTCCTTTGGTGTTGAATGGAAATGAATCTGTGACACAGTATTATAATGTTTCTTTGTCTGCCATTCAGCTCTATATTGATCCCTCGAAACCTTCCACGCGGTTAAGGAAATCCAATCAAGAAAGTGACTCTGAATCAGCCAGAGAGACAAGCAGCGATAGCAGCAGTGGCCATTGTCATGAAAGAGGACAAAAGTCTAATCATGGCAGTAGGAATCACCTTAATGCATTGGATGCATGCAATCATGCTTTGGAAAGGGTCTCACTAAGTAAACCTTCCACAGGTTCACCGAGTGAAGAGACTGAGAGCTGCAACCCTCCCGGTCAGCTTATATTTCAATACTTTGAGCGTGAGACACCTTATAATCGTGAGCCATTAGCAGATAAGATTTCTAGTCTCTCAAGTCAATTTCCAGAGTTGAAGACATACTGGAGTTGTGATCTTTCGCCTGCGAGTTGGGTTTCGCTGGCTTGGTATCCAATATATAGAATACCTACAGGTCCAACACTGCAAAGCCTGAGTGCATGCTTCCTGACTTTCCATTCTCTGTCAACAGCTTTACAGAGTTCAAATACCGAGCCGCTTAATATTCATTATTCAAGAGGTAGGGACATATCATCCAAGCTATCATTACCAATCTTTGGTCTTGCCCATCACAAGTTCAAAATTTCTATCTGGGATCCAGATGGAGTTTCTGAATCACAGAAAGCCAATTCACTGGCGCGAGCTGCTGAAAATTGGCTTAGGTTATTGCAAGTTAATCATCCGGATTACAATTACTTTATGACCCATTATACATATTTGAGATAA 1188 0.4293 MSATGGAAIAGGSRNRNRHLGENRFYSPPPLRKHREKQEQQRSSLSRTSSENRPGSSSDCSISSRATSDISNLDRFLEYITPHVPAQYLPKTSSRRWKTKEAELLPYYVLGDLWESFKEWSAYGAGVPLVLNGNESVTQYYNVSLSAIQLYIDPSKPSTRLRKSNQESDSESARETSSDSSSGHCHERGQKSNHGSRNHLNALDACNHALERVSLSKPSTGSPSEETESCNPPGQLIFQYFERETPYNREPLADKISSLSSQFPELKTYWSCDLSPASWVSLAWYPIYRIPTGPTLQSLSACFLTFHSLSTALQSSNTEPLNIHYSRGRDISSKLSLPIFGLAHHKFKISIWDPDGVSESQKANSLARAAENWLRLLQVNHPDYNYFMTHYTYLR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04886 395 PANTHER T15D22.8 28 390 - -
Trre15g04886 395 MobiDBLite consensus disorder prediction 43 64 - -
Trre15g04886 395 Pfam Protein of unknown function (DUF789) 71 387 IPR008507 -
Trre15g04886 395 MobiDBLite consensus disorder prediction 1 64 - -
Trre15g04886 395 MobiDBLite consensus disorder prediction 157 198 - -
Trre15g04886 395 MobiDBLite consensus disorder prediction 28 42 - -
Trre15g04886 395 MobiDBLite consensus disorder prediction 160 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04886 Trre-Chr15 58965099 58969239 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04886 - - gmx:100803393 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04886 15 58965099 58969239 Trre15g04886 15 58965099 58969239 ECH