Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04873 ATGGGCGTGTACGCTGATCTCGACGAAGCCTTGGCGTTGGCCTCTCTTCCCGGTGATGTTGACGGTTACATCTCCATTTGCGGTTACGGTTCTCTCCTCTCCGAAAAAAGTGCTAGAAGCACATTTCCTCATCTAATTAACTTCCGAACCGCAAAGTTAACCGGTTTCCGCCGTCTCTTCTCCGTAGTAGGAGCTTTCTTTTTCACTCATTCCATTGCCAACCTCAAAACTCAGGAAATTGCTGGTCTCTCTGTTGAGCCTTGTCAAGGTGAAACCATTATAATTACTGTTTTTGATATTAAGAAATCTGAGATTCCTGCATTTATCAAAAGAGAGCGCGAATATCGCTTTTTAGCTGTTATTCCTGAATCACTTGATGGGAAGCCATTTACCAATCCAGCGGTCCTTTGTTCATCTTACACTGATGAGGAATTCTTTAAATTTAAATGCACTGAGGGAAGGGAAATATATTTTCAACAATATGGAGAATATAATATCCATAAGATTTGGCGCGATGATGCTTTACCATGCCGTGTTTATCTTCGACACTGTGTTCTGGCTGCGAAAAGCCTCGGTGATGAAGCTTACAACAATTTCTTGGATCACACCTTCATTGCTGATCGCAAAACAACAATACGCCAGTACTTTGAGAAAATGGGCACAAGCATCATGGACGAAGAGCCCCCTGAATCCTTAAAAACACGTTATGGCGGTTGA 717 0.4268 MGVYADLDEALALASLPGDVDGYISICGYGSLLSEKSARSTFPHLINFRTAKLTGFRRLFSVVGAFFFTHSIANLKTQEIAGLSVEPCQGETIIITVFDIKKSEIPAFIKREREYRFLAVIPESLDGKPFTNPAVLCSSYTDEEFFKFKCTEGREIYFQQYGEYNIHKIWRDDALPCRVYLRHCVLAAKSLGDEAYNNFLDHTFIADRKTTIRQYFEKMGTSIMDEEPPESLKTRYGG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04873 238 PANTHER OS05G0358400 PROTEIN 19 238 - -
Trre15g04873 238 Gene3D - 20 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04873 Trre-Chr15 58862231 58864381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04873 - - adu:107463310 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04873 15 58862231 58864381 Trre15g04873 15 58862231 58864381 ECH
Trre15g04873 15 58862231 58864381 Trre3g01664 3 13319862 13322273 PCT