Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04511 ATGATTACCGCTTGGATCACTGACCTCTTCGCTTGCATGGGTGGTTGTTTTGGATGCTGTGTGAAACCTACACCAATTATTGCTGTTGATGAGCCGGCCAAAGGACTAAGAATTCAAGGGCAGACAATGAGAAAACCAACCGCATCAGATGGATTCTGGAGTTCTAGCCCTTGTGATCTGGATAACAGCACAATTCAATCTCAACGAAGTATATCATCTGTCAGTACTTTAAATCAAATCCTGTATCAAAGCAATGGAACTTCTACTGTAGGCACCGATCCTGAATTTGTAAACCAAGGTCTTCTTCTTTGGAATGAAAGCAGAGTTCAGTGGGTTGGACGTGGCTTATCTGAAAAGCAAAGCCAACAAAAACAAGAATCCCGACTAAATCGGAATGCAACTTATGAAAGTTTGCTTGGAACCAGACAACCTTTCCCCAAGTCTGTACCTTTATCAGAAATGGTTGAATTCCTGGTGGATGTTTGGGAGAGTGAAGGAATGTATGGTTGA 510 0.4235 MITAWITDLFACMGGCFGCCVKPTPIIAVDEPAKGLRIQGQTMRKPTASDGFWSSSPCDLDNSTIQSQRSISSVSTLNQILYQSNGTSTVGTDPEFVNQGLLLWNESRVQWVGRGLSEKQSQQKQESRLNRNATYESLLGTRQPFPKSVPLSEMVEFLVDVWESEGMYG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04511 169 Pfam Protein of unknown function (DUF4050) 132 168 IPR025124 -
Trre15g04511 169 Pfam Protein of unknown function (DUF4050) 56 127 IPR025124 -
Trre15g04511 169 PANTHER OS07G0479600 PROTEIN 2 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04511 Trre-Chr15 55749058 55751783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04511 - - gmx:100812832 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04511 15 55749058 55751783 Trre7g00214 7 1462365 1464818 ECH
Trre15g04511 15 55749058 55751783 Trre1g00699 1 5292376 5293585 ECH
Trre15g04511 15 55749058 55751783 Trre15g04511 15 55749058 55751783 ECH