Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04380 ATGGCGAAGCCTCGTAAGCCCAAGCCCGAAGACCCAAAGCCCGAAAACTCAGGCGCCGTAGTTCACCATCAAAAGCTATGCCTCTCTATCGACATGGATAAGCGCTTAGTTTACGGTTATACTGAATTGGAAATTGCGGTGCCGGAAATTGGGATCGTTGGGTTACATGCGGAGAATTTAGGGATTGAAAGTGTATGGGTTGATGGTGAACCTACGGAGTTTGAGTATTATCCTCATCAGTATCAGCAGAACGAGGATGAAAAACGATGGAGTTCGGTTTCTTCTCCTAGCTCCGCCGCTGATGCTGCTGTTTCAGTGTATTTGTCTTCTTTGGAGAAAGAACTTGTGCCTAATTTGCTCATTAATTGCTTTAAACCTTTCAAGACTGATACTGAACAGAAGCAGCAGGAGCAGGAGCAACCTGTTGCTGAAAATGGATTTCATTCGTCTGCCGAGCCTAAGCAGAATGTGAGAACAGTTCGTATTCACTATAGCATAGAAAAGGCGGAGACAGGAATCCACTTCAGAGATAATGTTCTTCATACCGATAATCAGATAAGGAGGGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTTGCAGCAATGCTGCTACGACTTGGAGTTCACTGTAGCACACAATCTTGTGGCTGTCAGTACTGGAAGCTTGTTATACCAGGTCTTAAGCAAGCACAATCCTCCTCGGAAAACATATGTCTATAAATTAGATGTTCCAGTTGCTGCAAGGTGGATATCGTTGGCTGTTGCCCCATTTGAATTTCTTCCTGATCATGAATTTGGCTTCATATCACATATGTGTTTGCCTCCTAATCTGACCAAAATGCAGCATACAGTGGAGTTCTTCCATAGCGCCTTCAGCTGCTATAAGGATTATCTTTCTGTCGACTTCCCATTTGACTCGTATAAGCAAGTTTTTCTAGAGCCTGAGATGGCAGTCTCATCATTGAGTTTAGGAGCCTCTATGAGTATATTTAGTTCTCAAGTTTTGTATGATGAGAAAGTTATTGACCAGACTATTGATACAAGGGTAAAACTTGCTTATGCACTTGCAAGACAGTGGTTTGGTGTGTATATCACTCCCGAGTCACCAAATGATGAGTGGCTCTTGGAAGGGCTCGCCGGTTTCTTGGCAGATTTTTATATTAAGAAGCATTTGGGCAATAATGAGGCGCGGTATCAGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGAGGAGCTACAGTTTTGAGCTGTTCAGCTTCTTGTAAGGATTTATATGGAACACAGTGCATTGGCTTGTACGGAAAAATAAGAGCCTGGAAGTCTGTGGCAGTTGTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTGCAAACTATAGTTACCCGGGCTCAGGATAAAACACGTTCAGTGAAAACACTTAGTACTAAAGAGTTTCGACATTTTGCTAACAAGGTTGGAAATCTAGAACGTCCTTTTCTTAAAGATTTCTTCCCACGTTGGGTCGGTTCTTGTGGATGTCCTGATTTAAGAATGGGGTTTTCCTATAACAAACGGAAGAATATGGTTGAATTGGCTGTGTTGAGAGGATGCACATCATTGCAGACTTCAAGTACAGCTATTCTTGATATTCATCCAGATACTGAAAATCGAGATGGAGATTCTGGATATCCTGGAATGATGAGTATCAGGGTGTATGAACTTGATGGTATGTATGACCATCCTATTCTACCAATGGCTGGAGAAGCATGGCAGCTTTTGGAAATTCAATGCCACTCAAGGCTTGCTGCTAGACGATTTCAGAAATCAAAGAAAGGTGTAAAACATGATGGCTCTGATGACAACGGCGATGTGCCTTCAATGGATATACGCTCCAGTACAGAGTCTCCTTTATTATGGATAAGAGCAGATCCTGACATGGAGTACCTTGCTGAGGTTCATTTTAATCAACCGGTTCAGATGTGGATCAACCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCCATTGCAGCCCTTGAGGCATCACCTCAGATATCATTTTCTGTTGTAAATGCCCTGAACAGTTTTCTTACCGACTCCAAGGCTTTCTGGAGAGTAAGAATTGAAGCAGCATTTGCATTGGCAAATTCAGCATCCGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTCGGAGATTTGACCCTGACATTGGACTCCCAAAGCCAAATGATTTTCATGATTTTGCCGAGTATTTTGTTCTTGAGGCCATTCCACACGCTGTAGCTACGATTAGAGCTGCTGACAAGAAAAGTCCAAGAGAGGCTATTGAATTTGTTTTGCAACTATTGAAGTATAATGACAACACCGGGAACCCTTACTCAGATGTCTTCTGGCTTGCTGCATTGGTCCAATCAATTGGCGAGTTTGAGTTTGGGCAACAGAGTATTCTCCTACTGTCATCACTCCTCAAGCGCATTGACCGGCTTTTACAATTTGATAGTCTCATGCCAAGCTACAATGGAATCTTGACTGTCAGTTGTATCAGGACATTGGCCCAGATTGCCCTAAAGCTTTCAGGATTCATTCCACTTGATCGTGTATATGAACTTGTAAAGCCTTTTCGAGACCTAAAGACAATTTGGCAAGTTCGAATTGAAGCAAATAGAGCACTCCTTGATCTTGAATTCCACTCCAAGGGCATTGATGCAGCACTTTTATTATTCACCAAATATGTTGAGGAGGAGCCTTCCTTAAGAGGCAAGTTAAAACTGGCCACCCATGTTATGAGGCTATGCCAGATGAGAGATGGTTTGAATTCAGATGATGAAATTACAAGCCAAACTCTTGTCTCTTTGCTCAGTTTACTGGAAGGGCGTATGGCATTTAATAATGTCTTTCTCCGTCACTACTTGTTTTGCATATTACAAATACTGGCAAAAAGACCCCCAACTCTACATGGAATTCCCAGAGAAAGTAGAATGTTGCATATGAGTCTTACAGAAGCTTCTAACTATCAGAGGAACCTATTTGCTCTTGATTCCGAAACTAAACCTTTGGAACTGCCAAGTTCCACCGAAGACCTTACACGAGATTTTATCATAACTGAAGATTTAAGGGATGCACCTGATGAAGCTCCTAAGGACCAAACTTTTGATGCTCCTAAGGACCAAGATTTTGAAGCTCCTAAGGACCAAGATTTTGAAGCTCCTAAAGTACATGTTGAAGCTCTGGAAGTGCCTCTCGAGATTCCCAAAGAAGACTTGACAGGATTTCCCCCTGAAGCACCAATTGAAGCTCCCAAATGTAACCAAAAAACTGAAGCTCCCAAAGAAATTTCCAAGGAAACCGATACTGTATCCAATAGCCATGAAAGAAAAAGGCTAATCAAAATCAAGGTTAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAATGGTTGAACGCTCTTTAGGTGGTCGTGAAATTGATCACGGAGCTAGCAGTTCAGTTTCAGTAGACGCACCTCAGAGATTTGCCGAGACTATTAGCATTGGTAATAACAATATCGAGGAAGTTAATTCTTGGCATGATCGTGGTTCCCGCATGACTGCGAGCATTGGCAGTGTAAAAATTTTCAGTGATGGTGATGAATTGGTCAAAGAACTCCAATGCACTGCTGATTCAAGTGTAGTTTACTCACAACCTCAGCCAGAAGATCCATCACCATCTAGTTTTATACAAGATAACAATATAGATGCTGATGCACGTCGATTTGCCAGCCTTCAAACACTTTCAGTTGGTAGATTTGATCATGATAGAGAATCATTTGGCAAAGAAGTTCCTGCTCGTGCGAAAGATAAACACAAAGATAAGGATAAGAAACGGAAAAGTCACAAGGGACGCCATGATGACCCGGAATATTTGGAGCGAAAACGATTGAAAAAAGAGAAAAAACGCAGGGAAAAAGAATTGGCAAAACTACAAAGTGTAGAAGCAAAGAAACCCTCCGTAGACTTGTCATGTAAGAAAGAGGAACCTGAAGCGGAAAATGCGAAGCAGCAGCTGAAATCTGTTGAACCCAGCGGGCACAGGGAAAAAGAATTGGCAAAACTACCAAGTGTAGAAGCAAAGAAACCCTCCATTGACTTGTCATGTAATAAAGAGGAACCTGAAGCGGACAATGCGAAGCAGCAGCTGAAATCTGTTGAACCCAGCGGTAATAATTCTATATCAGACACTGGGAACATTGATACCAAACCCAGGGCATCCGAAGGTACATCTGGTGCGCCCAAAATTCGTATTAAGATTAAAAACCGAATGCTCAGCAAGTCGTAG 4353 0.4209 MAKPRKPKPEDPKPENSGAVVHHQKLCLSIDMDKRLVYGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHQYQQNEDEKRWSSVSSPSSAADAAVSVYLSSLEKELVPNLLINCFKPFKTDTEQKQQEQEQPVAENGFHSSAEPKQNVRTVRIHYSIEKAETGIHFRDNVLHTDNQIRRARCWFPCIDDNLQQCCYDLEFTVAHNLVAVSTGSLLYQVLSKHNPPRKTYVYKLDVPVAARWISLAVAPFEFLPDHEFGFISHMCLPPNLTKMQHTVEFFHSAFSCYKDYLSVDFPFDSYKQVFLEPEMAVSSLSLGASMSIFSSQVLYDEKVIDQTIDTRVKLAYALARQWFGVYITPESPNDEWLLEGLAGFLADFYIKKHLGNNEARYQRYKANCAVCKVDNGGATVLSCSASCKDLYGTQCIGLYGKIRAWKSVAVVQMLEKQMGPESFRRILQTIVTRAQDKTRSVKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPDLRMGFSYNKRKNMVELAVLRGCTSLQTSSTAILDIHPDTENRDGDSGYPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSRLAARRFQKSKKGVKHDGSDDNGDVPSMDIRSSTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQISFSVVNALNSFLTDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVATIRAADKKSPREAIEFVLQLLKYNDNTGNPYSDVFWLAALVQSIGEFEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTVSCIRTLAQIALKLSGFIPLDRVYELVKPFRDLKTIWQVRIEANRALLDLEFHSKGIDAALLLFTKYVEEEPSLRGKLKLATHVMRLCQMRDGLNSDDEITSQTLVSLLSLLEGRMAFNNVFLRHYLFCILQILAKRPPTLHGIPRESRMLHMSLTEASNYQRNLFALDSETKPLELPSSTEDLTRDFIITEDLRDAPDEAPKDQTFDAPKDQDFEAPKDQDFEAPKVHVEALEVPLEIPKEDLTGFPPEAPIEAPKCNQKTEAPKEISKETDTVSNSHERKRLIKIKVKQSSATSRADTDNQMVERSLGGREIDHGASSSVSVDAPQRFAETISIGNNNIEEVNSWHDRGSRMTASIGSVKIFSDGDELVKELQCTADSSVVYSQPQPEDPSPSSFIQDNNIDADARRFASLQTLSVGRFDHDRESFGKEVPARAKDKHKDKDKKRKSHKGRHDDPEYLERKRLKKEKKRREKELAKLQSVEAKKPSVDLSCKKEEPEAENAKQQLKSVEPSGHREKELAKLPSVEAKKPSIDLSCNKEEPEADNAKQQLKSVEPSGNNSISDTGNIDTKPRASEGTSGAPKIRIKIKNRMLSKS 1450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04380 1450 Gene3D tricorn interacting facor f3 domain 20 255 IPR042097 -
Trre15g04380 1450 CDD M1_like_TAF2 23 510 - -
Trre15g04380 1450 Pfam Peptidase family M1 domain 286 483 IPR014782 GO:0008237|GO:0008270
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1235 1256 - -
Trre15g04380 1450 Coils Coil 1314 1339 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1235 1257 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 610 631 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1114 1133 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1096 1133 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1275 1450 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1303 1318 - -
Trre15g04380 1450 FunFam Transcription initiation factor TFIID subunit 2 112 255 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1342 1379 - -
Trre15g04380 1450 FunFam Transcription initiation factor TFIID subunit 263 514 - -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1275 1293 - -
Trre15g04380 1450 SUPERFAMILY ARM repeat 454 993 IPR016024 -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1404 1428 - -
Trre15g04380 1450 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1325 IPR037813 GO:0005669
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1048 1073 - -
Trre15g04380 1450 Gene3D Neutral Protease Domain 2 268 514 IPR027268 -
Trre15g04380 1450 MobiDBLite consensus disorder prediction 1387 1402 - -
Trre15g04380 1450 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 271 518 - -
Trre15g04380 1450 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 17 256 IPR042097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04380 Trre-Chr15 54416552 54433535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04380 K03128 - gmx:100792795 2244.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04380 15 54416552 54433535 Trre15g04380 15 54416552 54433535 ECH