Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04372 ATGGCTGATCTTAACCATAGCTCAGCCCAAACACACAGACCCACCACCACCACCGCCACCAACAACAACTCCTCCTCCTCCTCCGCCGTCTTTCTAAGAAAGCTTCAAGACAATCTCTACACACCAAACTCAACCCAACTCGCTGGCATCTTAACTCTTCTCATTACTGGATCCATTTTCCTCCTTCTCACCGGTTTATCCGTCGCTGGAACTGTTATCTCTCTCATCTTCTTCTCTCCATTGATCATCGTTTCAAGCCCAATATGGGTACCGGCGGGTACCTTCTTCTTCCTCCTCGCCGCTGGATTCTTGTCCATGTGTGGATTTGGTGTTGTCACCGTCGCTGCTTCTTCTTGGTTGTATCGTTACTTTAGAGGTCTTCACCCACCCGGTTCAGACCGGGTTGATTACGCTCGGAGCCGGATTTATGATACTGCATCACACGTTAAAGATTATGCTAGAGAATACGGTGGGTATTTGCAGAGTAAGGTTAAAGATGCAGCGCCAGGCGCTTGA 516 0.4903 MADLNHSSAQTHRPTTTTATNNNSSSSSAVFLRKLQDNLYTPNSTQLAGILTLLITGSIFLLLTGLSVAGTVISLIFFSPLIIVSSPIWVPAGTFFFLLAAGFLSMCGFGVVTVAASSWLYRYFRGLHPPGSDRVDYARSRIYDTASHVKDYAREYGGYLQSKVKDAAPGA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04372 171 MobiDBLite consensus disorder prediction 1 25 - -
Trre15g04372 171 PANTHER OLEOSIN 40 166 IPR000136 GO:0012511|GO:0016020
Trre15g04372 171 Pfam Oleosin 46 157 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04372 Trre-Chr15 54315525 54316040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04372 1 171 Lipid Metabolism Gene Families AT3G18570 52.907 2.25e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04372 - - tpra:123921957 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04372 15 54315525 54316040 Trre15g04372 15 54315525 54316040 ECH