Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04367 ATGCTACAAAATCCAAGAATACTGCGAACTTCTCCTCAACCATTCAACCCACCACCTCATACATCAGCACCATCACCTTCATCATTCCAACTATTACCCACCACACCACATTTTCCAACCCTCAAACAGCAATGCAGGTTATCGCGTAGAGAGCTCACAATCTACAGCAACTCTTGCTTGCTGCTTCTTTTGGGCGATGGATCGAGAGCAAGAGCAGAAGATGATGTAACCAACAGCGACCAACAGGGAGAAAATTTGACCAATACTCTCAGTTGCACTGAAAGAAAACCAACAAAACAAGTTTTCTTTGACATATCTGTTGATCGCGAACCAGTTGGTCGTGTTACTATAGAGCTCTATGGAGACGATGTCCCAGCAGGTGTTGAGAGGTTTAGTAAGATTATCAGTGGAGCTGCCGGTATAAGCTACAGAAGGAAAGAGTTTGTCAAAATCATGCCGAATTACGTCCAACATGGCGGTCTTAGATCCTATGGGGTGGATGCAGAACTTGCTAACAAGACAGGAAGCAATTTGGCTGCTGAAAAACTTGTTGAGGAATGGGAGAGAATTTATGAGAAATGCCCTGGGACTAAAAACGTGGCTGGAAGTGTAGGCATTATTGTGAGAGATCCATCAAAACCACCCCCTAAGTTTAAACTGGTTGCAAGACTAGGGAAACTTGAGATTGATCAAGAAGAAGTTGGAACAGATCCTAATGGGACTGAATTTGTCATTTCGACAAAGGATTCGCCAGAATTGGATACTTCGTCTCTGGTAATTGGAAGGGTGGTAGGAGGGATAGAGGTTGTGCAGAAGATTAGTCAGGTGAAAACAGTACAAGAGAATACAAGCTCTCCATATTTCAAGGTGGCAAAGCTTATAGGAGACAAGAGGGCTGTTGTAGCAGAAAGGGGATTCAACCGCCCTTACTCCAAAGTTGTTGTTACAAACTGTGGTGTAATACAGTAG 969 0.4365 MLQNPRILRTSPQPFNPPPHTSAPSPSSFQLLPTTPHFPTLKQQCRLSRRELTIYSNSCLLLLLGDGSRARAEDDVTNSDQQGENLTNTLSCTERKPTKQVFFDISVDREPVGRVTIELYGDDVPAGVERFSKIISGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELANKTGSNLAAEKLVEEWERIYEKCPGTKNVAGSVGIIVRDPSKPPPKFKLVARLGKLEIDQEEVGTDPNGTEFVISTKDSPELDTSSLVIGRVVGGIEVVQKISQVKTVQENTSSPYFKVAKLIGDKRAVVAERGFNRPYSKVVVTNCGVIQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04367 322 FunFam Peptidyl-prolyl cis-trans isomerase B 91 322 - -
Trre15g04367 322 Gene3D - 89 322 IPR029000 -
Trre15g04367 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 227 242 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 242 254 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 255 270 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 MobiDBLite consensus disorder prediction 1 28 - -
Trre15g04367 322 SUPERFAMILY Cyclophilin-like 97 321 IPR029000 -
Trre15g04367 322 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 102 320 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 103 286 IPR002130 GO:0000413|GO:0003755
Trre15g04367 322 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 322 IPR044185 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04367 Trre-Chr15 54275634 54276737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04367 K03768 - gmx:100796313 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04367 15 54275634 54276737 Trre15g04367 15 54275634 54276737 ECH