Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04366 ATGAGCGAAGATTCTGAGAAGAGGTTTCGTTCCATCATGGATAAGCTCTTCCATTCTTCGAAATCTTCATCCAACAATAATTCACTCACCAGTTCATCGGGGGTGCAATTATCAACTTCCAGGGGTAAGAAACGTGCTTTTCAGTCAATTGTATCAGAATCACAAGGACATCTCTGTCGACCGTGGGATCGTGCTGATTTTATGAACAGATTAGCCACATTTAAATCTATATCATGGTTTGCTAAACCTAAGAGAGTAAGTGCTGTCAATTGTGCTAGAAGAGGTTGGATCAATGTGGATGTTGACACTATAGCCTGTCAAGAATGCGGGGCGCGTCTTCTGTTCTCTACACCAGCATCTTGGAATCATCAGCAGGTGGAGAAGGCAGCGTTGGTTTTCAGCTTAAAGTTGGATAATGGACATAAATTACTTTGTCCATGGATTGACAATGCCTGCAGTGAAACAGTGGCACGATTTCCTCCAACACCGCCTCCAGTATTAGTTGATAATTTCCGAGAACGCTGTTCTGCTCTCTCGCAATTGTCAGCTCTTCCGCGTATTTCATCTTCTACAATAGACCACATGCAAAGCCCGCATCTGGAGGACTTTCTTGGACAATCATTGATGCAGGAGTGTGAAAATGGTTCTTCCGAACATTCTGGAATAGAAGATGTCAGTAGTCAAGAGGAACTGAAATTGTATTACCAGGCTCAAAGGCTAATAAGTTTATGTGGCTGGGAACTTCGCTCTTTACCTTATGCAGTTGACTGCAAGGATGTATCAAATCAGTCTCATAAAAATTCAACTATTGTATACTGTCCTCAAGTAGTTGATGATGCGATGAATAAAAGTCTCGTTTCTGCTGACAATAATGGAAGTTCAAAAGTGGATGAAAATTCCAAGTATTCTATTGGGGAACAAATAGATCCCAATTCTGTAGTTTTCGATTGTTCCCTATGTGGAGCCACTGTTGGATTGTGGGCATTCTGTACAGTTCCTCGGCCTGTGCAATCAATCAGATTAGTGGGATATGCAGAAGTGAATGGTGAAAATGATGCTGTGACCCAGAGTTCACTCGATAAAAATACAAATGATCTTGAAAATAGGCAGGGGGTAAATAATGCCATGTCCAACGTTGCAAATTCATCAAAGGACACATCTTCAAGTCTAAATATGACAATTGCAGGGGGTCCTCCCCCAACAAAGCAAAACTTCAAAGCAATAATATCTCTGCCTGTTATTGGTCAGAATTTAAGAGCTCGTCTTTCTTATGATTATGATATTAGAGATCATTTTTTTGTTTATGGCGGCAGTAGTCAGTCGCATTCACAGGAGATCAGGATTCAGGAGATAATTGATAACACGGTTAATACCTCTATTAGACAACTTGTTCCTGTATCATCTGAGATAAGAGAAACTTCAAATTGTGAAACTGATTCTCAAGCAAGCATTCGCGACTCAGCTGTAGACAATGTTTTCGAGGGCACCCATTCTGCACAACAACCTTCCAGTCGTAGGGACAAGATGCCCGTACAAGCAGAAACTGATAGATTGAAGAGTTCATCTGTAGGCGATTCTAGTAGCTCTCAGATAAACTTGGCAGAAGATGAAGCACTTTCTGTATCACATAAGACCAAGGATGCTAGTAATGTTGAAATTTGTGTAGTGAAAGAAAGAGTAAAGAATCCAACTAGCAGTGAAGGTGTACATAATAGTTTAGGTAAGTTTAAGAATCCAACAGTGTCTGAGAAAGCAATGGAATTTGATCCAATCAGACAGCACAGACACTTCTGCCCATGGATTGCATCAGATGGAGATGGAGAGCCTGGGTGGAAACAAACATTATCTGCTCTGTATCGACCAAAAGAACATTCACAACATTCTCCAAATACATCTCCGTCATCTATGCCCATTATTAAGGTAGATGACCCTGTTGGTTCAATCAGAAAGCTTTTCAAGTCTCCACCTACGAAAAGAACAAAGCTTACTCACATTTCGAGCCAAAATGCAGAGCATGGGTAG 2022 0.41 MSEDSEKRFRSIMDKLFHSSKSSSNNNSLTSSSGVQLSTSRGKKRAFQSIVSESQGHLCRPWDRADFMNRLATFKSISWFAKPKRVSAVNCARRGWINVDVDTIACQECGARLLFSTPASWNHQQVEKAALVFSLKLDNGHKLLCPWIDNACSETVARFPPTPPPVLVDNFRERCSALSQLSALPRISSSTIDHMQSPHLEDFLGQSLMQECENGSSEHSGIEDVSSQEELKLYYQAQRLISLCGWELRSLPYAVDCKDVSNQSHKNSTIVYCPQVVDDAMNKSLVSADNNGSSKVDENSKYSIGEQIDPNSVVFDCSLCGATVGLWAFCTVPRPVQSIRLVGYAEVNGENDAVTQSSLDKNTNDLENRQGVNNAMSNVANSSKDTSSSLNMTIAGGPPPTKQNFKAIISLPVIGQNLRARLSYDYDIRDHFFVYGGSSQSHSQEIRIQEIIDNTVNTSIRQLVPVSSEIRETSNCETDSQASIRDSAVDNVFEGTHSAQQPSSRRDKMPVQAETDRLKSSSVGDSSSSQINLAEDEALSVSHKTKDASNVEICVVKERVKNPTSSEGVHNSLGKFKNPTVSEKAMEFDPIRQHRHFCPWIASDGDGEPGWKQTLSALYRPKEHSQHSPNTSPSSMPIIKVDDPVGSIRKLFKSPPTKRTKLTHISSQNAEHG 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04366 673 MobiDBLite consensus disorder prediction 494 508 - -
Trre15g04366 673 MobiDBLite consensus disorder prediction 494 531 - -
Trre15g04366 673 MobiDBLite consensus disorder prediction 621 637 - -
Trre15g04366 673 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 1 662 - -
Trre15g04366 673 MobiDBLite consensus disorder prediction 621 673 - -
Trre15g04366 673 MobiDBLite consensus disorder prediction 659 673 - -
Trre15g04366 673 MobiDBLite consensus disorder prediction 515 531 - -
Trre15g04366 673 Pfam C3HC zinc finger-like 61 184 IPR012935 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04366 Trre-Chr15 54270967 54275262 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04366 - - tpra:123921272 1220.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04366 15 54270967 54275262 Trre15g04366 15 54270967 54275262 ECH