Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04362 ATGAAAACACTAATCATGGAAGAAACAAACACAAACACAAACACAAACTCAATTCCTCAAGAACCTTCTTCCAAAAGACACTTTCATTGGACAAACAAGGTTGGAAATGAAGACCCAGAAGAAGTTCCTACCACCATATCCAAACTCATAGAAGAACAAAACACTAAAAAACATGATGAAAAGGTTGTTGTTGTTGTTTCAGGACATGCAGCAGCTAGGAAAAAGCTACAATCCGTAGCAATTTCAAGGCTACGTTCTGTTCTTACAGTATTCAACAAAAACCGTTCAAATCTACCTTCTGGTCTTGGTTCAAAAGTTGTTGGAACCCTTTTCGGATATCGTCGTGGACATGTTCATTTTGCTTTTCAAAAAGACCCCATTTCACAACCAGCTTTTTTGATTGAACTTGCAACACCAATAAGTGGTTTGGTTCGTGAAATGGCTTCTGGGTTGGTTAGAATTGCTCTTGAATGTGATAAAGTTAATAAGGACAAAGAAACTGACAAGAAAAATTTAAGATTGTTACAAGAACCACTTTGGAGGACTTATTGTAATGGAAAAAAGTGTGGATTTGCTAACAGAAGAGAATGTGGAGAAAAAGATTGGGATATTTTGAAAGCTGTTGAACCAATTTCAATGGGTGCTGGTGTTTTACCAAGTGCTGAAGCTGGTTCTTCTGAAGGTGAAGTTATGTATATGAGAGCTAGATTTGAGAGAATTGTTGGGTCTAGAGATTCTGAAGCTTTCTATATGATGAATCCTGATAGCAATGGTGCACCTGAACTTAGTGTTTATTTGCTTAGAGTTTAG 810 0.3691 MKTLIMEETNTNTNTNSIPQEPSSKRHFHWTNKVGNEDPEEVPTTISKLIEEQNTKKHDEKVVVVVSGHAAARKKLQSVAISRLRSVLTVFNKNRSNLPSGLGSKVVGTLFGYRRGHVHFAFQKDPISQPAFLIELATPISGLVREMASGLVRIALECDKVNKDKETDKKNLRLLQEPLWRTYCNGKKCGFANRRECGEKDWDILKAVEPISMGAGVLPSAEAGSSEGEVMYMRARFERIVGSRDSEAFYMMNPDSNGAPELSVYLLRV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04362 269 Pfam Protein of unknown function, DUF617 106 268 IPR006460 GO:0010274
Trre15g04362 269 NCBIfam uncharacterized plant-specific domain TIGR01570 106 269 IPR006460 GO:0010274
Trre15g04362 269 PANTHER PROTEIN MIZU-KUSSEI 1 52 269 IPR006460 GO:0010274
Trre15g04362 269 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04362 Trre-Chr15 54226598 54227407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04362 - - gmx:100797914 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04362 15 54226598 54227407 Trre15g04362 15 54226598 54227407 ECH