Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04349 ATGTTCCGTTTCCGCATAAGCAACACCGTTGTTGGTGCACTCAACATACTCTCTTTACTCCTTGGTCTCGCCGCAATCGCTTCCTCTGCTTACATCCACATCCGTGGTGGTTCCGATTGCCAAAAGGTACTTCAATATCCCCTCTTAATCGGCGGTATATTTGTCGTCATTGTGTCGGGACTTGGAATCGCGGGATCGTTGTTCGGCATTAACAAGGCGCTCTATAGTTACCTTTTGGTGACATTTTTGTTGGTGATTGGACTCGCTTTCTTCACCGTGTTCGCGGTGTTCGTCACAAATAGAGGGGTGGGGAAACAAATTTCTGGTAAAGGTTATGGTGAGTATAGAGTCGCTGATTTCTCTCATTGGTTGCAACGATATGTTGTGAATGAAGAGAATTGGGATGAGTTCAAGAGTTGTTTGATGGATGCTCATGTTTGTCAGAATCTCGCCATCAATGGTGGTCGGAATAATGACTCTCTCATTTTCAAACACTTGTCTACCACTCAGGCCGGTTGCTGTAAGCCACCGGTGTACTGTGGATTTACGATGAAGAATGCTACGTTTTGGGAAGTACCGAAATCCGGTTTGGCAGCGAATAATTCAGATTGTGCAACATGGAATAATCGGCAGGACAAATTGTGCTATGATTGCAATTCATGCAAAGGAGGAGTATTGGCTAACATAAGGAACCAATGGAGACATTTAACTGTGTTCAATGGTTTTATGCTTGTTCTTGTCACTGCCATTTACGCCATGGGATGCTATGCTATCAGGAACAACCGAATGGACTCACGCATCGTTAACCCTTAA 813 0.4453 MFRFRISNTVVGALNILSLLLGLAAIASSAYIHIRGGSDCQKVLQYPLLIGGIFVVIVSGLGIAGSLFGINKALYSYLLVTFLLVIGLAFFTVFAVFVTNRGVGKQISGKGYGEYRVADFSHWLQRYVVNEENWDEFKSCLMDAHVCQNLAINGGRNNDSLIFKHLSTTQAGCCKPPVYCGFTMKNATFWEVPKSGLAANNSDCATWNNRQDKLCYDCNSCKGGVLANIRNQWRHLTVFNGFMLVLVTAIYAMGCYAIRNNRMDSRIVNP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04349 270 PANTHER TETRASPANIN-8-RELATED 5 264 IPR044991 GO:0009734|GO:0016020
Trre15g04349 270 Pfam Tetraspanin family 8 253 IPR018499 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04349 Trre-Chr15 54060368 54061272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04349 4 262 Miscellaneous Gene Families AT1G18520 46.038 1.87e-79 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04349 - - gmx:100815322 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04349 15 54060368 54061272 Trre15g04349 15 54060368 54061272 ECH