Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04346 ATGGAAGGAAGCATGAGCGAGAGCGATTCGGTTTTCGAATCGCTGAATCTCAATCCTCAACTCTTCTTCAACGAAATTCTCAACACCGTCGACGATTTCTTCATCGAAACTTTCGATTTCTTCTTCCAGGAAGCATCCACAAAGCTCAACACTGAAGCTACTCAAAGATCTCAACATCTCAGACAGGGTGTTGATTGCATTCGTCAAAAGGTTCAATCTGTTTTGGATCAAAAACTTGCTGTTTGGGAAAAATACTGCCATTATCACTGTTTTTCTCTTCCTGAAGGTTTTCGGTTGCCAAACACACTCAATGATGAATCAAGTGGGAATGATATTGTGACTGATGCTACTTCTGATCAAGAACTAGATGCTCAGTTAGAATCGTTGAGGAAAAAATTAGCTGAGGTTGGGAAAGAGTCTGAAATGCTGAGTCAAGAAATTCATGCATTAGAGAGGCAGTCTTCTCACAATGCTCGGTATATCAAGGAGGCAGTACAATTATTTGAGCAAAACTCTTACACCGAGTTGTTTCAGGAGATTATGGCAACCGCCTCAGAACTTCGATTGAAGATGGGAAAGCTTAACACCAACATGATTGAAGAGACTGGAAAAATGGAAGCAAAAAGGATTGACAACAATAAAATGGATATTTCTGCAATATATGCTGCCAAAGGCCTCTCGAATACCAAATTAGAAGATCTTCAAGAATTTGTAACTCTTATGAAGAGTACGTGA 735 0.3973 MEGSMSESDSVFESLNLNPQLFFNEILNTVDDFFIETFDFFFQEASTKLNTEATQRSQHLRQGVDCIRQKVQSVLDQKLAVWEKYCHYHCFSLPEGFRLPNTLNDESSGNDIVTDATSDQELDAQLESLRKKLAEVGKESEMLSQEIHALERQSSHNARYIKEAVQLFEQNSYTELFQEIMATASELRLKMGKLNTNMIEETGKMEAKRIDNNKMDISAIYAAKGLSNTKLEDLQEFVTLMKST 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04346 244 Coils Coil 119 153 - -
Trre15g04346 244 PANTHER PROTEIN MIS12 HOMOLOG 1 237 IPR008685 GO:0000278|GO:0000775|GO:0005634
Trre15g04346 244 Pfam Mis12 protein 11 144 IPR008685 GO:0000278|GO:0000775|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04346 Trre-Chr15 54042837 54045145 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04346 - - gmx:100306256 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04346 15 54042837 54045145 Trre15g04346 15 54042837 54045145 ECH