Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04324 ATGCAGTTATGGAACAAAGCTCGAAGTTTTGCGGAAGAAACCGCGAAAAAATCACAGCAAGAAATTTCCACCAGTGCTCCCAAATTCACCGAAATCATAGCAGAAACTACCAAAGAGATCGCGGCACAAGCTTCCATTCACTTAGCCGAACCTTTTTTCAACAAGGATGTCGATCTCCAAAGTTTCGGTATCACCGAAGAATTAAGGGAATTCGTCAAAGGAATCACCGTCACTATCTTCCGTGATTTCCCTCTTCAAGATGATACGGAATTGTCTGATGTTCCTGCAGTTTCAAATATTAGACAGGATCTAACCGAGTGGCAGGAAAAACATGCCAATCTTGTTCTTTCTACTGTCAAGGAGATTTCAAAATTGAGGTATGAGCTGTGTCCGCGTGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAGAATCGGTACATGGAAGAGACTAAACTAAAATCACCCGAGGAAGTTAAAGAGACTAAAACATCAAATTCATCACATCAGCAAGACTTGGATGCATTTCTTCTGGGAGATACAGGAAGCAGTGATGATGACCCAGCTTTGAAGTTTAACAGAATGAGATGGAATAGTTGTGGTGGGGTGAACCGTGGTTCTGAAGAGTTGAAAGTAGATTCTAAAGCTCTTACTTGCAGATTCCAATGCAAAGGTAGTGTGAATGTTATGGGGATGGAGGCTTGTGCAACGGATCAGACAGTTGCTTTAACTCGAGTGGGAAGTTAA 780 0.4115 MQLWNKARSFAEETAKKSQQEISTSAPKFTEIIAETTKEIAAQASIHLAEPFFNKDVDLQSFGITEELREFVKGITVTIFRDFPLQDDTELSDVPAVSNIRQDLTEWQEKHANLVLSTVKEISKLRYELCPRVMKERKFWRIYFILVNNHIAPYENRYMEETKLKSPEEVKETKTSNSSHQQDLDAFLLGDTGSSDDDPALKFNRMRWNSCGGVNRGSEELKVDSKALTCRFQCKGSVNVMGMEACATDQTVALTRVGS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04324 259 Gene3D BSD domain 81 160 IPR035925 -
Trre15g04324 259 ProSiteProfiles BSD domain profile. 106 151 IPR005607 -
Trre15g04324 259 Pfam BSD domain 106 151 IPR005607 -
Trre15g04324 259 SUPERFAMILY BSD domain-like 63 156 IPR035925 -
Trre15g04324 259 PANTHER BSD DOMAIN-CONTAINING PROTEIN 14 180 - -
Trre15g04324 259 SMART wurzfinal6 99 151 IPR005607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04324 Trre-Chr15 53813916 53817738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04324 3 199 EF-hand Containing Proteins AT1G69030 41.935 7.76e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04324 - - psat:127073696 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04324 15 53813916 53817738 Trre15g04324 15 53813916 53817738 ECH