Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04318 ATGCAGCATTTCGTGGATTTGCAAAACAGTTCCAACTTCGGTGACTCAGATTCATGGCTTTCATCATCCTCCACCGCTGTTGCTTCAGCACCTAATTCCAATTTGAATCGTGATCTCTTCAACGATCTCGTCGAAATTGTCCCTCTTGTTCAATCCCTCATAGATCGTAAATCTAGTCGTTCCTTTACTCGTCGTGGTTCCATGATCTACACCAAGGCACCTGCAAGAGAATCATTGGTTAAAAAGGCTACAGATTCAAAAAGTAGGAATGTTGCTCAATCTATTTCTGCCACAAAGATAAGGGACCATGGAGCAAATGAACAAGGACAAAATGAAAACAATAATTCTGATAGCTTTTCTATGTTTTCTGGAAGAGCTTTTACATCAGAGAAGGACATAGAGGAGTTGGCTACATTGAAGGAACAGATAGGGGACCTTCAGCTAAAATTAAGGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTTGAGAGACCAGATGAATGCTGTTAATGCAAAACTTGATGAAATGAAACACCATGTTTCAGAAAAGGACGGTTCACTAAAGTACACTCAGCAACAGCTCTCTGATGCTAAGATTAAGCTTGCAGATAAGCAAGCTGCCCTTGAAAAGATACACTGGGAAATGATAACATCCAACAAGAAAGTGGAGAAACTCCAAGAAGAGCTAGATTCTGTGCAAACAGATATTTCGACATTCACGTTGCTGCTTGAAGGCTTAGCAAAAACTGACACTGCTAAGTATTCCGATGACTATGACACCAAGCCTTATGTTTTCAATTACGTTCCTGATATTGATGATATGGATGAGATGGAATGCCAGAAAATAGAAGAAGCGAGAAAAGCTTACATTGCCGCAGTTGCTGTTTGCAATGAAAAACAAGATGAAGAATCTATTGCTGCAGCTGCTAATGCTAGGTTACATCTTCGGTCACTACTTTTCAAATCCAAAAATTTCAACCTCTGA 987 0.3972 MQHFVDLQNSSNFGDSDSWLSSSSTAVASAPNSNLNRDLFNDLVEIVPLVQSLIDRKSSRSFTRRGSMIYTKAPARESLVKKATDSKSRNVAQSISATKIRDHGANEQGQNENNNSDSFSMFSGRAFTSEKDIEELATLKEQIGDLQLKLREKDELLKSAENLRDQMNAVNAKLDEMKHHVSEKDGSLKYTQQQLSDAKIKLADKQAALEKIHWEMITSNKKVEKLQEELDSVQTDISTFTLLLEGLAKTDTAKYSDDYDTKPYVFNYVPDIDDMDEMECQKIEEARKAYIAAVAVCNEKQDEESIAAAANARLHLRSLLFKSKNFNL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04318 328 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 322 IPR040289 GO:0008017|GO:0010497
Trre15g04318 328 Coils Coil 136 180 - -
Trre15g04318 328 MobiDBLite consensus disorder prediction 78 120 - -
Trre15g04318 328 Coils Coil 216 236 - -
Trre15g04318 328 MobiDBLite consensus disorder prediction 85 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04318 Trre-Chr15 53767194 53771209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04318 - - gmx:100806411 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04318 15 53767194 53771209 Trre15g04318 15 53767194 53771209 ECH