Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04317 ATGGGTTGGGCAATAGCTCTACATGGCGGCGCCGGCGACATCCCATACTCACTTCCAGCGGAACGCCGTCAACCACGCGAAGAATCCCTCCGTCACTGCCTCCAAATCGGTATCAAAGCTCTCAATTCCAAAATGACCCCTCTAGATGTCGTTGAACTTGTTGTTCGTGAGTTAGAGAACATTCCACACTTCAATGCAGGAAGAGGTTCTGTTCTCACCAATAAAGGCACAGTTGAAATGGAAGCTTCTATAATGGATGGTAAAACTATGAAATGTGGTGCTGTTTCTGGTCTTACTACTGTTGTTAATGCTATTTCTTTGGCTCGTTTGGTTATGGAAAAAACTCCTCACATTTATTTGGCATTTGATGGAGCTGAGGATTTTGCTAGACAACAAGGTGTTGAGACTGTAGATTCAAGCCATTTCATTACTCCAGAAAATATTGAAAGACTAAATCAGGCAAAAGATGCAAATAGGGTCCAGATTGATTATACCCAACCCATCCAAAATGATACTAAGAATGAAACAGAAACACCATTTGCTAATGGTGATAGTCAAATTGGAACTGTTGGATGTGTAGCTGTTGATAGTAATGGGAATCTAGCTTCTGCAACATCAACTGGTGGATTAGTGAACAAAATGGTAGGTCGAATCGGCGACACGCCAGTCATTGGTGCTGGAACATATGCCAATGAATTTTGTGCAGTTTCTGCAACAGGAAAAGGCGAAGCAATAATTCGCGGGACAGTAGCAAGAGATGTGGCTGCGTTGATGGAATTCAAAGGCCTTTCTCTAAAGGAAGCTGCTAATATTGTTGTACAAGAGCGCACACCAAAGGGTACTGTTGGTTTGGTTGCTGTGTCTGCTGCAGGAGAAATTGCAATGCCTTTTAATACAACAGGCATGTTTAGAGCTTGTGCTACTGAAGATGGGTATTCTGAGGTTTCAATTTGGCCAGATACTAAAATTGAGTGA 975 0.4256 MGWAIALHGGAGDIPYSLPAERRQPREESLRHCLQIGIKALNSKMTPLDVVELVVRELENIPHFNAGRGSVLTNKGTVEMEASIMDGKTMKCGAVSGLTTVVNAISLARLVMEKTPHIYLAFDGAEDFARQQGVETVDSSHFITPENIERLNQAKDANRVQIDYTQPIQNDTKNETETPFANGDSQIGTVGCVAVDSNGNLASATSTGGLVNKMVGRIGDTPVIGAGTYANEFCAVSATGKGEAIIRGTVARDVAALMEFKGLSLKEAANIVVQERTPKGTVGLVAVSAAGEIAMPFNTTGMFRACATEDGYSEVSIWPDTKIE 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04317 324 CDD Asparaginase_2 4 311 - -
Trre15g04317 324 FunFam Isoaspartyl peptidase/L-asparaginase 189 320 - -
Trre15g04317 324 PANTHER L-ASPARAGINASE 3 317 IPR000246 GO:0016787
Trre15g04317 324 Pfam Asparaginase 3 318 IPR000246 GO:0016787
Trre15g04317 324 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 3 318 IPR029055 -
Trre15g04317 324 Gene3D (Glycosyl)asparaginase 189 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04317 Trre-Chr15 53759343 53761287 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04317 5 296 Miscellaneous Gene Families AT4G00590 25.076 5.66e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04317 K13051 - gmx:100799400 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04317 15 53759343 53761287 Trre15g04317 15 53759343 53761287 ECH