Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04312 ATGGTTAGGCCACGTTTCAAGTTACATAATTTGTGTATTGGTCATGTTACCACACCTCGTGTTAGAGCTTGTTCTACATCATCATCATCATCATCAGCTTCTTTTGGATCAAAATTTGCAAATAGAACTGAGTTTTCAAGCAATGGAATTCAAGATAACAAAGGTGATGAAAGTGGCAATAAAGTAATGGTGGTTGTGGATTCTAGCTTTGAAGCTAAAGGTGCTCTTGATTGGGCACTTTCACATACTATTCAGAAACAAGACACTGTTGTTCTTGTTCATGTAGCTAGACCCCTTAGAGAAGGTGGTGAGTCTGATGTGAAGTTTAATGTGAAGGCTTATCAACTTCTCTTAGATATGAAGAGTATGTGTGAAATGAAGAAACCTGGGGTGCTAGTGAATATAGTATTACTTGAAGGTGAAGAAAAGGGTGCTGCAATAGTGCAAGAAGCAAAGCAACAAAGGGTGTCTTTATTGGTGGTAGGACAAAGAAAACGTTCTATCTTGTGGTGCTTGATGAGGAAGTGGACAAGAATGAGAAGAACAAAAAGTGGAGTTGCTGAGTATTGTATACAAAACTCACCTTGTATGACCATTGCAGTGAGAAGGAAGAATAAGAAACTTGGAGGGTATTTGATTACTACCAAACGCCATAAAAACTTTTGGCTTTTGGCTTAG 678 0.3835 MVRPRFKLHNLCIGHVTTPRVRACSTSSSSSSASFGSKFANRTEFSSNGIQDNKGDESGNKVMVVVDSSFEAKGALDWALSHTIQKQDTVVLVHVARPLREGGESDVKFNVKAYQLLLDMKSMCEMKKPGVLVNIVLLEGEEKGAAIVQEAKQQRVSLLVVGQRKRSILWCLMRKWTRMRRTKSGVAEYCIQNSPCMTIAVRRKNKKLGGYLITTKRHKNFWLLA 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04312 225 Gene3D HUPs 59 210 IPR014729 -
Trre15g04312 225 CDD USP_Like 61 201 - -
Trre15g04312 225 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 205 - -
Trre15g04312 225 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 225 - -
Trre15g04312 225 Pfam Universal stress protein family 61 202 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04312 Trre-Chr15 53728537 53731412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04312 54 167 Receptor kinase-like Gene Family AT1G17540 27.119 1.35e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04312 - - tpra:123884923 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04312 15 53728537 53731412 Trre15g04312 15 53728537 53731412 ECH