Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04307 ATGCAGAGCTTAGTTCGGAGGCTCGCGGTGGTCACACGCCATCGCCATCCCCACCAAGCCAACCTCTCCTTCAATCCTCACCGTATCTCTCACACTCGTTCTTCAACTCACATCGCCGAACCTTCCAATCTAGGGCACCACATTCCCTCATCATCATCCTCAGCCATTCATCATTTTCACTCATGGCGTTCCCAAATTCGCTCCTCCTTTTCCCAATCAATCATGGTTCGAAACTATCTCTCCACTTTATTCGCCAAAAACCTACTTCATCGTAGTCTTTCCAGAGTTCATTTTCAGCGTCAGAACTTCAATTTCAACCACAATTATAATTCTTACCGGCGTGGTTGGAGATCATGGTTCTACAGGCTAACGCCGAATGACGTGGTTCTGGGCTTGATTGTAGCTAATGCTGCTATTTTTTTATTTTGGAGGATAGCAAGTGAAAAGTTTATGCTAAATAATTTTACTATCTCTTTGGACAATATTAAGAGCGGACGCCTGCACACTTTGATAACCAATGCATTCAGTCACGTTGATACCTGGCACTTAATTTCCAACATGATTGGACTCTACTTCTTTGGAGTGAATATTGCAAGTAAATTTGGACCTGAATTTCTGCTGAAGCTATATCTTGCTGGTGCAATTGGTGGTTCTGTTTTCTATCTGGTGCATCAAGCCTACAAGGCTCAAACATCAAAGGGCTGGGGCGCAATCAGTGCTTCAAAGGAAGTAGCATTGGGAGCAAGTGGAGCTGTGAATGCAGTTATGCTGCTGGACATATTCCTCAATCCAAGAGCAACTTTATACTTGGACTTTTTTATACCAGTTCCTGCGGCGTTGCTGGGGATCTTTTTGATCGGGAAAGATATGCTGAGGATAATAGAGGGAGACAAAACGATATCAGGATCTGCACATTTAGGGGGTGTTGCAGTTGCAGCCATAGCATGGGCAGGAGTTCGGAGAGGAAGATTCTAA 975 0.4441 MQSLVRRLAVVTRHRHPHQANLSFNPHRISHTRSSTHIAEPSNLGHHIPSSSSSAIHHFHSWRSQIRSSFSQSIMVRNYLSTLFAKNLLHRSLSRVHFQRQNFNFNHNYNSYRRGWRSWFYRLTPNDVVLGLIVANAAIFLFWRIASEKFMLNNFTISLDNIKSGRLHTLITNAFSHVDTWHLISNMIGLYFFGVNIASKFGPEFLLKLYLAGAIGGSVFYLVHQAYKAQTSKGWGAISASKEVALGASGAVNAVMLLDIFLNPRATLYLDFFIPVPAALLGIFLIGKDMLRIIEGDKTISGSAHLGGVAVAAIAWAGVRRGRF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04307 324 SUPERFAMILY Rhomboid-like 127 321 IPR035952 -
Trre15g04307 324 Gene3D - 126 317 IPR035952 -
Trre15g04307 324 PANTHER RHOMBOID PROTEASE 20 319 - -
Trre15g04307 324 FunFam RHOMBOID-like protein 12, mitochondrial 123 323 - -
Trre15g04307 324 Pfam Rhomboid family 162 319 IPR022764 GO:0004252|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04307 Trre-Chr15 53615296 53619806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04307 - - gmx:100819148 371.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04307 15 53615296 53619806 Trre15g04307 15 53615296 53619806 ECH