Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04291 ATGGCTGTTGCTGCTCTTACTCTTGCACTTCTTCTTTTGCCCTTCACCGCCATTCCATCTAGTGCTAATTGGTGTGTTTGCAAAGATGGAGCTGATACAATCTTGCAGAAAACCTTGGACTATGCTTGTGGAGCTGGAGCTGACTGTAACCCTCTCCATCAAAACGCACCTTGTTTCCAACCAAACACTGTTAGAGCTCACTGCAGCTATGCTGTCAATAGCTTTTTCCAAAAGAAGGGTCAAGCTCAAGGAACTTGTGACTTTGCAGGAACAGCTACTGTAACTGCATCTGATCCAAGTGTTAGTGGCTGTGTCTTCCCTTCAAGTGCCAGTGGTGCAGGCACTAGTACAACAACCCCAGTGTCAGGCACTACACCCTCCATGGGAACCACTCCTTCCACCGGAACCCCATCAACTAGTACCGGCATGGGCACAGGCACTGGCACCGGCACCGGAACAGGCACCGGTTCTACTCCATACAGCACAACTCCTGGAGTATTAGGAGGTATAGGTAGTGGTATGGGGCCATCAGGAGCTGGAGGAATGAATGATGATAGTCATGGTGGGACTAGACTTTTGGACACTAGTTTCTTATCAATCCCACTCTTTTCTGTTTTCATTATGCTTTGGTGGGGTTGA 639 0.4867 MAVAALTLALLLLPFTAIPSSANWCVCKDGADTILQKTLDYACGAGADCNPLHQNAPCFQPNTVRAHCSYAVNSFFQKKGQAQGTCDFAGTATVTASDPSVSGCVFPSSASGAGTSTTTPVSGTTPSMGTTPSTGTPSTSTGMGTGTGTGTGTGTGSTPYSTTPGVLGGIGSGMGPSGAGGMNDDSHGGTRLLDTSFLSIPLFSVFIMLWWG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04291 212 Gene3D - 18 114 - -
Trre15g04291 212 FunFam Glucan endo-1,3-beta-glucosidase 4 19 110 - -
Trre15g04291 212 MobiDBLite consensus disorder prediction 110 159 - -
Trre15g04291 212 Pfam X8 domain 24 93 IPR012946 -
Trre15g04291 212 PANTHER BETA-1,3 GLUCANASE 10 126 IPR044788 -
Trre15g04291 212 SMART X8_cls 23 106 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04291 Trre-Chr15 53475332 53478671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04291 20 119 Miscellaneous Gene Families AT2G16230 42.574 9.26e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04291 - - gmx:100812033 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04291 15 53475332 53478671 Trre15g04291 15 53475332 53478671 ECH