Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04276 ATGGATGATGACATAGATTTTGAGTTGTTTCTCCACACATGGAATACAAAGAATCCAACGGATCGTATTTTCATTGTATCTTTTTTCGTTGCTGCTCTGGTTGGAATTTTGACTATAGCCTACACAGCTTTTCAGTGGAGGAGAAACATCAATTTAAGTTGGATGAAAGCTATAGCTAGATCTAAGAAAAACCCAAAGGCAAAGCACAAAGTTCCTGTTGCTCTTCATACTTGGAGTCTAGAATCTGTATCCCGCGCAAAGAATTCAAACTGCTGTGTGTGTTTTAAGTCTATGTCACCCTCTCAAACTCTAGGGCCTATAGTAGCTTCAGACAGTTTTATCCACCGGTGCTGTATTTGTGGTGCGGTAGCTCATCTAAGTTGTTCTTCTAGTGCTCACAAGGACTGTAAGTGTGTTTCTATGACTGGATTTGAGCATGTTGTGCACCAGTGGGCTGTTCGTTGGACAGATGTAGCCGATCAGCCCGATGAAACTACTTTCTGTAGTTACTGTGAAGAACCATGTGGTGGGACCTTCCTCAGTGGTTCCCCTATATGGTATTGCCTGTGGTGCCAACGTTTAGTACATGTTGATTGTCATGGTTCAATGTCTAATGAAACGGGTGACATATGTGATTTGGGCCCTTTTAAAAGATTAATACTGTCTCCTCTGCATGTGAAGGAATTGAACAGAAACTTAGCAGGTGGTTTTCTTAGCTCAATTACACATGGTGCAAATGAGATAGCATCTTCAGTTCGGGCTAGTATTAGGAGCCAGAGCAAAAAGTATAAGCATGCAAATGAAACACTGGCTGAATCTGGGAATAGTGAGAGCACTAGTGAAATATCCACAGAAAGCACTGCGGATTCGCATCAAATAGCTAATGGACATAATGTAATGGAGGGAAAAAATAGTGTTGGTTCAAATAAAGAAGTGCAGCATCAAGATACTGAAGTAGATAATAAGATGGACAGAAAACCCAGTCTTACGCAGAATACATCATCTATAAATCAGGAGGAGTCCCAGGTGTTAGGAGTGAAACAGAATTATGAGTTGACTGGTTTGCCTCCAGATGCAAGACCATTGTTAGTTTTTATAAACAAAAAGAGTGGTGCCCAGCGAGGAGACTCACTTAGGCTGCGTCTGAATATTCTCTTAAATCCTGTTCAGGTGTTTGAATTGAGCTCATCACAGGGGCCAGAGATGGGACTTTATTTGTTTAGAAAGGTGTCTCACTTCAGAGTTCTTGTATGTGGCGGAGATGGTACTGTTGGTTGGGTTTTGAATGCAATAGAAAAACAAAATTTTGATTCCCCTCCCCCAGTTGCTATTCTTCCCGCTGGTACTGGAAATGATCTCGCTAGAGTTCTCTCTTGGGGAGGTGGCTTGGGTCCAGTGGAAAGGCAAGGGGGTCTTACCACAATTCTGCATCATATAGAACATGCTGCGGTTACTATTCTTGACCGGTGGAAGGTAACAATCAGCAACCCACAAGGAAAGCAACAACCGCAACCACAAAAGTTTATGAACAATTATCTTGGAATTGGTTGTGATGCAAAGGTTGCTTTGGACATCCATAATATGCGGGAGGAAAACCCAGAGAAGTTTTATAACCAGTTTATGAATAAAGTTCTATATGCAAGAGAAGGAGCTAAAAGCATAATGGATAGGACATTTGAGGATTTCCCTTGGCAGATTCGTGTTGAGGTGGATGGAGTTGAAGTTGAAGTCCCTGAGGATGCTGAAGGGGTGCTTGTTGCAAATATTGGAAGCTATATGGGAGGTGTAGATTTGTGGCAAAATGAGGATGAAAGTTATGATAATTTTGATCCACAGTCTATGCATGACAAGATACTTGAAGTTGTGAGCATATCTGGAACATGGCACCTTGGGAAGCTTCAGGTTGGGCTTTCTAGAGCTCGAAGACTTGCGCAAGGACAGTCAATCAAGATACAATTGTTTGCTAAGTTTCCTGTTCAAATTGATGGAGAACCTTGGTTTCAGGAGCCCTGTACAATTTCCATAGCTCATCATGGCCAGGCCTTCATGTTGAAGAGGGCGGCTGAGGAACCTCTTGGTCATGCAGCTGCAATGATCACTGATGTGCTTGAGAATGCTGAAACCAATAATGTAATTAATGCTTCACAAAAGAGAGCTCTTCTTCATGAAATGGCTCTCAGGCTGTCCTAG 2190 0.4224 MDDDIDFELFLHTWNTKNPTDRIFIVSFFVAALVGILTIAYTAFQWRRNINLSWMKAIARSKKNPKAKHKVPVALHTWSLESVSRAKNSNCCVCFKSMSPSQTLGPIVASDSFIHRCCICGAVAHLSCSSSAHKDCKCVSMTGFEHVVHQWAVRWTDVADQPDETTFCSYCEEPCGGTFLSGSPIWYCLWCQRLVHVDCHGSMSNETGDICDLGPFKRLILSPLHVKELNRNLAGGFLSSITHGANEIASSVRASIRSQSKKYKHANETLAESGNSESTSEISTESTADSHQIANGHNVMEGKNSVGSNKEVQHQDTEVDNKMDRKPSLTQNTSSINQEESQVLGVKQNYELTGLPPDARPLLVFINKKSGAQRGDSLRLRLNILLNPVQVFELSSSQGPEMGLYLFRKVSHFRVLVCGGDGTVGWVLNAIEKQNFDSPPPVAILPAGTGNDLARVLSWGGGLGPVERQGGLTTILHHIEHAAVTILDRWKVTISNPQGKQQPQPQKFMNNYLGIGCDAKVALDIHNMREENPEKFYNQFMNKVLYAREGAKSIMDRTFEDFPWQIRVEVDGVEVEVPEDAEGVLVANIGSYMGGVDLWQNEDESYDNFDPQSMHDKILEVVSISGTWHLGKLQVGLSRARRLAQGQSIKIQLFAKFPVQIDGEPWFQEPCTISIAHHGQAFMLKRAAEEPLGHAAAMITDVLENAETNNVINASQKRALLHEMALRLS 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04276 729 PANTHER DIACYLGLYCEROL KINASE 33 687 IPR037607 GO:0004143|GO:0007165
Trre15g04276 729 Gene3D - 506 676 - -
Trre15g04276 729 MobiDBLite consensus disorder prediction 269 312 - -
Trre15g04276 729 FunFam Diacylglycerol kinase 147 207 - -
Trre15g04276 729 FunFam Diacylglycerol kinase 357 481 - -
Trre15g04276 729 SMART c1_12 149 211 IPR002219 -
Trre15g04276 729 SMART c1_12 76 136 IPR002219 -
Trre15g04276 729 CDD C1 76 136 - -
Trre15g04276 729 SMART dagk_c4a_7 361 490 IPR001206 GO:0016301
Trre15g04276 729 CDD C1_DGK_rpt2 149 214 - -
Trre15g04276 729 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 358 683 IPR016064 -
Trre15g04276 729 MobiDBLite consensus disorder prediction 263 340 - -
Trre15g04276 729 Pfam Diacylglycerol kinase accessory domain 509 665 IPR000756 GO:0004143|GO:0007205
Trre15g04276 729 SUPERFAMILY Cysteine-rich domain 143 206 IPR046349 -
Trre15g04276 729 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 148 211 IPR002219 -
Trre15g04276 729 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 357 496 IPR001206 GO:0016301
Trre15g04276 729 Pfam Phorbol esters/diacylglycerol binding domain (C1 domain) 149 209 IPR002219 -
Trre15g04276 729 Gene3D - 147 207 - -
Trre15g04276 729 SMART dagk_c4b_2 508 665 IPR000756 GO:0004143|GO:0007205
Trre15g04276 729 MobiDBLite consensus disorder prediction 326 340 - -
Trre15g04276 729 Pfam Diacylglycerol kinase catalytic domain 361 461 IPR001206 GO:0016301
Trre15g04276 729 FunFam Diacylglycerol kinase 506 675 - -
Trre15g04276 729 Gene3D - 358 491 IPR017438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04276 Trre-Chr15 53377161 53382913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04276 1 729 Acyl Lipid Metabolism Gene Families AT5G07920 75.204 0.0 1147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04276 K00901 - gmx:100802426 1258.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04276 15 53377161 53382913 Trre15g04276 15 53377161 53382913 ECH