Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04256 ATGGATAAAGCTCTCACTAAAATTGGTAGCTTTTGGGTCTCCAAGAAAGCCAAACAAGAGTTTTCCAACATAACCAACGACCTATCTTCTCTCTCAAATACTGTTGAAGATAAGGCAAAACTTTTCATCAACAAGCTCAAAGGCAAAACTCAGAAATCTTTACCAGAACTCCTTAGAGAGCACAACCTTCCTCCGGGTCTGTTTCCGCGTAACATAACATGCTACGAGTTTGATGAATCAAAAGGAAAATTGATGGTACATTTGTCCTCTCCTTGTGAGGTATGCTTCAAGGACTCATCCATTGTGAGATATTCAAACCGTGTCAAAGGAACATTGTCAAAGGGGAAACTCATTGTTATAGATGGAATGAAAACCAAAGTTCTTGTTTGGGTTAAGGTCACTAGTGTTTATGTTGAGAATTATAAATCTGACAAAGTATGGTTCACTACCACTGGTGTCAAAAAATCAAGGCCTAAAGATGCTTATGAAATGTCTCGTGAAGCTATTAAGGTTGAAGAGTTTTAA 525 0.379 MDKALTKIGSFWVSKKAKQEFSNITNDLSSLSNTVEDKAKLFINKLKGKTQKSLPELLREHNLPPGLFPRNITCYEFDESKGKLMVHLSSPCEVCFKDSSIVRYSNRVKGTLSKGKLIVIDGMKTKVLVWVKVTSVYVENYKSDKVWFTTTGVKKSRPKDAYEMSREAIKVEEF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04256 174 Gene3D - 32 174 IPR036758 -
Trre15g04256 174 PANTHER T31J12.3 PROTEIN-RELATED 40 166 IPR007493 -
Trre15g04256 174 SUPERFAMILY At5g01610-like 3 173 IPR036758 -
Trre15g04256 174 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04256 Trre-Chr15 53232857 53233887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04256 - - gmx:100776470 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04256 15 53232857 53233887 Trre15g04256 15 53232857 53233887 ECH