Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04215 ATGACTGAAACCGCTGCACCAGAGGTTATCGAAAACGCCGAACCCGCGGAGGTTTCTGCCGTCGATTCAGCAATGAAAGACGAGAGCAATCAGAAGCGTACAAGAGATGACAACGCAAAAGAAGGTGTTTCAAAGAAGCAAAAGGTGGAGGTGGAAGAGAAGAAGAAACCGTCAGGTCCTGTGAAATTAGGTCACAAAACTTTTGCCTCTTCTTTAGAGTTGTTCGATTACTTCAACACTTTTCTTCATGCTTGGCGTCCTAATCTTAATGTTAATAAGTATGAACATACAATGTTACTGGAATTGCTTATGAAAGGTCATCCAGAGCCTGATAAAAAGATTGGTGGACAAACCTGTGCATTCCAAGTCCGCAGGCATCCTACATGGAAAAGCAAGTGTTTCTTTCTCATTAAGGAGGATGAATCAGCTGATGATTTTAGCTTCCGTAAATGTGTGGATCATATTCTTCCCTTGCCAGAAGCGATGCAAGTGAAACGTGATGCAAACACAGTTTTAGCTTGTCCTGGTGGAGGAAAGCATCGCGGTGGTGGGAAAAAAGGAAAGTCCAAACATTGA 576 0.4306 MTETAAPEVIENAEPAEVSAVDSAMKDESNQKRTRDDNAKEGVSKKQKVEVEEKKKPSGPVKLGHKTFASSLELFDYFNTFLHAWRPNLNVNKYEHTMLLELLMKGHPEPDKKIGGQTCAFQVRRHPTWKSKCFFLIKEDESADDFSFRKCVDHILPLPEAMQVKRDANTVLACPGGGKHRGGGKKGKSKH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04215 191 MobiDBLite consensus disorder prediction 26 60 - -
Trre15g04215 191 Gene3D - 57 155 - -
Trre15g04215 191 PANTHER PROTEIN EMBRYO DEFECTIVE 514 25 169 IPR044673 -
Trre15g04215 191 MobiDBLite consensus disorder prediction 1 62 - -
Trre15g04215 191 Pfam Protein of unknown function (DUF3223) 80 152 - -
Trre15g04215 191 FunFam Predicted protein 57 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04215 Trre-Chr15 52804474 52806336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04215 - - psat:127073796 220.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04215 15 52804474 52806336 Trre15g04215 15 52804474 52806336 ECH