Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04169 ATGGATCATCGTCAATGGCGTCCCAATCTCAATCCCAGACCAATCCAATACCAAAACAATCTCTGCCCAAATTGCTTCGTTCAACACTTCCCCTTTTGCCCACCACCTAACCCTAACTTCGCTTACGATTCCGATTTCGACAGAACCTTCAAGAAACCAAGAATCGAAGACGAAGACGAACGAAGATTGAAGCTTATTCGTGATCACGGTCTTAATCCACCTCAATTTCAACATCCTCATCACGCTTACGTCACACCCTCACTCTCACCACCACCACCACCACCTCCTCCGCCGCCGCCACACCATCAATTTCCTCCAACACCACCACCACCACCACCAACTTATCATCCTCAACAACACCACAGCGAGATCAATGCACCTTACCACGATCACAATTTTCAATTTCAACCATATCCAAATCATAATTTGAATTCTAGAGAATTGCACCATCCTTATCCGTATCCAAATCCTTACCCTAATGGTACTACCAATAGTTTTCCGGATAATTCTGGTCAATTGGAAGGTTCTAGATTCTTCAGTAACATGCCTCCTCTTCCTAATTCTCCTCCACCACCTCTTCCAATGGATCCACCCGTTAATCACTTCAAAACCTACTTTTCTCAACCTAAGAAACCACCTTCTCTTTTTCCTGTTACTTCTTCCGTTTCTCATGAACCTCACCCCTTACACCAACCTTATTTTCACAACAATAAACCCCACCTTCCCGAATTTTCCACTGGATGTCCTGTGGAGGAATCCTCGAAACAGTACACCGGAGATGCTCAACATTTTTCACAAAATCGAATGTCTGATGAGAAGCCGAAGTTTGTTGATGCTTCCCAATTATTCCGGAATCCACATCGAACTTCACGTCCTGATCATTTTGTGATCATACTTCGTGGTTTTCCCGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTGCGGGATCTAGAGGTCGAAAATGGTGGCGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACCGAGGTTGAAAAGGTTGAGGATAATGATGGATCAAAATCTTCAAGTTCAGGAAGAAACAAGAGGCCTGTAATTAAAAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAAACTGTTGAGGAGGGAGTTTTTACCTTTATTATAGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGTTATGAAGTTTACATTTTAGAAGCTACTTACAAGGACCCAGCGGGTTGTGCTGCAAGGAATGTCCATGGTTTTACACTGCAGGACATAGAAAAGATGGCTGAGCAATGGGAAGAAGCTCCATCCTTGTATCTGCAGCTTGATGCGAAGTCACTATTTCATGGAGATGATCTAAAAGAAAACAGAATACAGGAGGTTGACATGGATATGGACGATGATCTTGATGATGCTTTAGTTGCAGCGCAAGGAAGAGAAGCTGACAAAGCTGTTGACCCTCCTGTCAAGGATGATGGTGGCTCCATAAAGGATATGAAGAGATGGGATGCTGAAGAGGAACATCCAACAAAAGTCAGAGAACTGGGTAAAAGCAAATGGTCAGAAGATTTTGGTGAAGATGACATCGACCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGGAACGAAAATCTGTACATTGGGGTGATAAGGCTGGCAAAACAGGATTTTCTATAGGCACTGCAAGGAAGGTAAACGCTCTGTCATTGGTGATTGGACCTGGTGCTGGATACAACCTGAAGTCGAATCCGTTACCTGAAGTGGAAAGTCGAACCCAAAATAGTGCGGAACCGAAGAAGCACAGCAAATTTCAAGAGCGGATACGGGCTGAGCATGAATCATTCAAAGCTGTCTTTGATGGGAGACGTCCACGGATTGGACTTAATGTAGAGGAGGACTGA 2004 0.4366 MDHRQWRPNLNPRPIQYQNNLCPNCFVQHFPFCPPPNPNFAYDSDFDRTFKKPRIEDEDERRLKLIRDHGLNPPQFQHPHHAYVTPSLSPPPPPPPPPPPHHQFPPTPPPPPPTYHPQQHHSEINAPYHDHNFQFQPYPNHNLNSRELHHPYPYPNPYPNGTTNSFPDNSGQLEGSRFFSNMPPLPNSPPPPLPMDPPVNHFKTYFSQPKKPPSLFPVTSSVSHEPHPLHQPYFHNNKPHLPEFSTGCPVEESSKQYTGDAQHFSQNRMSDEKPKFVDASQLFRNPHRTSRPDHFVIILRGFPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDNDGSKSSSSGRNKRPVIKKVMEYCYEPEMEEAYRSSMLKAFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTLQDIEKMAEQWEEAPSLYLQLDAKSLFHGDDLKENRIQEVDMDMDDDLDDALVAAQGREADKAVDPPVKDDGGSIKDMKRWDAEEEHPTKVRELGKSKWSEDFGEDDIDQTEGMKGNINALSGLIHQYGKERKSVHWGDKAGKTGFSIGTARKVNALSLVIGPGAGYNLKSNPLPEVESRTQNSAEPKKHSKFQERIRAEHESFKAVFDGRRPRIGLNVEED 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04169 667 Gene3D - 295 461 IPR027417 -
Trre15g04169 667 MobiDBLite consensus disorder prediction 85 117 - -
Trre15g04169 667 MobiDBLite consensus disorder prediction 617 641 - -
Trre15g04169 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 295 462 IPR027417 -
Trre15g04169 667 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 232 656 IPR026314 GO:0005634
Trre15g04169 667 FunFam YLP motif-containing protein 1 isoform X3 295 460 - -
Trre15g04169 667 MobiDBLite consensus disorder prediction 70 164 - -
Trre15g04169 667 MobiDBLite consensus disorder prediction 627 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04169 Trre-Chr15 52279880 52287900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04169 K17602 - gmx:100775851 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04169 15 52279880 52287900 Trre15g04169 15 52279880 52287900 ECH