Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04165 ATGAACACTATGACGACGCCGTTTCAACAAGGACCACCGCAAACGGTGAGAAGATTGGCGGTCGAAGTTGTTGATGCACGCAACCTTCTTCCCAAAGATGGTCAAGGAAGTTCAAGTCCTTATGTTGTGGTAGATTTCGATGGTCAGAGAAAACGAACCACAACCCGGTTCAAGGAGCTTAACCCGGTTTGGAACGAGTCACTTGAGTTCATTGTTTCCGACCCGGAAAATATGGAGTTTGAAGAGCTTGAAGTTGAGGTTTATAATGATAAGAAATTTGGGAATGGTAGTGGCCGAAGAATCATTTTCTCGGTAGAGTGA 321 0.4486 MNTMTTPFQQGPPQTVRRLAVEVVDARNLLPKDGQGSSSPYVVVDFDGQRKRTTTRFKELNPVWNESLEFIVSDPENMEFEELEVEVYNDKKFGNGSGRRIIFSVE 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04165 106 Gene3D C2 domain 5 100 IPR035892 -
Trre15g04165 106 SMART C2_3c 18 104 IPR000008 -
Trre15g04165 106 Pfam C2 domain 18 95 IPR000008 -
Trre15g04165 106 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Trre15g04165 106 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 95 IPR035892 -
Trre15g04165 106 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 19 93 IPR047259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04165 Trre-Chr15 52253541 52253861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04165 5 103 Lipid Metabolism Gene Families AT1G74720 66.337 1.85e-43 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04165 - - gmx:100783882 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04165 15 52253541 52253861 Trre15g04165 15 52253541 52253861 ECH