Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04140 ATGCTCCAAATGTCTTCTTCTTCTTCTTCTTCTTCAATTGTTTGTGGCAGTAGTACCAAATTTATGGTACCATTATCATTACCACCATCTTTTAACATCAGACAGAGGAAGAAAAGATTGGTTCTTGATTATTGTGGTTTTAATAAAGTAGTACTAGGAACAAGGCATGTGATTATTAAGGCATCAAGTGACGTGGCTTCACCCTCCTTCTGGGAAAATTTCAAACCTCCCAAATCCTCTTCCACTCATTCTTTCAGTGACATTCTCTGGCCCTCTGCAGGGGCATTTGCAGCAATGGCTATATTGGGAAAACTGGATCAGTTATTGACGCCAAAAGGTCTCTCAATCACAATTGCACCTTTAGGAGCAGTTTCTGCTATCCTCTTTGCCACACCACAAGCCCCTTCTGCGCGGAAGTACAATATGTTGATGGCCCAAATAGGTTGTGCAGCCATTGGTGTTTTAGCGTTTACATTATTTGGACCTGGATGGCTAGCCAAGAGTGCTAGTGTTGCAGCTTGTGTCGCTTACATGATTTACACCGACACTATTCACCCCCCAGCCGTAAGCATGCCGTTGCTTTTCATCGATGGTGTTAAGTTGCAACACTTGAGTTTCTGGTATGTTTTGTATCCCGGGGCAGCAGGATGCATTCTACTTTGTTTCATTCAAGAGGTTGTTCTATACATGAAGAAAAATTTCAAATTCTGA 711 0.4219 MLQMSSSSSSSSIVCGSSTKFMVPLSLPPSFNIRQRKKRLVLDYCGFNKVVLGTRHVIIKASSDVASPSFWENFKPPKSSSTHSFSDILWPSAGAFAAMAILGKLDQLLTPKGLSITIAPLGAVSAILFATPQAPSARKYNMLMAQIGCAAIGVLAFTLFGPGWLAKSASVAACVAYMIYTDTIHPPAVSMPLLFIDGVKLQHLSFWYVLYPGAAGCILLCFIQEVVLYMKKNFKF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04140 236 Pfam HPP family 118 227 IPR007065 -
Trre15g04140 236 PANTHER TRANSMEMBRANE PROTEIN DDB_G0269096-RELATED 67 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04140 Trre-Chr15 51948646 51950390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04140 - - vun:114176851 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04140 15 51948646 51950390 Trre15g04140 15 51948646 51950390 ECH