Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04120 ATGAAGACTGTTATTTCCATAGGTTTCTTGTTTTGTTGCTCTCTTTTGTTCCTGCTTTTGGATTCTTCAACTTCACTTCCTCTATGTGTTGATTCAAGGGCACCCTTTACCCTCAATAATACCACACTCAAGTTTTGTCCTTATAATGGAAGTACTTGTTGCAACTCCATACAAGATGCACAAATACAGAAGCAGTTTCAACAGATGAATGTATCTGATACTGCCTGTTCCTCACTTTTGAAATCAATACTTTGTGCGAGGTGTGACCCTTATTCAGGGGAGCTGTTTACAATTCAATCGACAACCAGATCAGTTCCTTTGCTTTGCAATTCGGCCATTCCAGCGAATTCTTCTCAGTCAAAGGCATCACTAGATGACTTCTGCTCTCAAGTATGGGATACATGTCAAACTGTGTCAATAATAAACTCACCATTTTCCCCTTCCTTACAAGGTGGTGGTGGAGGATTACCAGCTAATAAAAATGCAACAAAACTGAATGAATTATGGCAGTCGAAAACCGATTTTTGTAAAGCTTTTGGAGGAGCATCCAATAATGAATCGGTATGTTTCGAGGGTGAACCTGTTGCATTAAATAACACTGATACTCCAGTTATCCCTCCTCATGGTTTGTGCCTTGAGAAAATTGGGAATGGATCTTATCTCAATATGGTTGCTCATCCCGATGGATCTAGCCGTGCGTTTTTCTCAAGTCAAATGGGTAAAGTTTGGTTAGCAACTATTCCGGAAGAGGGATCAGGAGGACAGTTGGAGCTTGATGAATCAAGTCCTTTTGTTGATCTAACTGATCAAGTTTATTTTGATACTCAATTCGGAATGATGGGAATGACATTTCATCCAAATTTCGCAAACAATGGTCGATTCTTTGCTTCGTTTAACTGTGATAAAGATAAATGGTCAGGATGCAATGGAATATGTTCTTGTAACTCAAATGTTAACTGTGATCCGTCAAAGATAGGTCCTAGTAATGGCGCTCAACCGTGTCAATATCAAACTGTTATTGCAGAATATACTGCTAATGGCACTGCATCTAATCCATCCTCGGCTGAAAGTGCTAAACCAACTGAGGTGAGAAGGATATTTACTATGGGCCTCCCATTTACATCTCAACACGCCGGTCAAATACTCTTTGGACCCGATGATGGTTATTTATACTTCATGATGGGAGATGGAGGTGGTTCAGGTGATCCATACAATTTTTCTCAAAACAAGAAATCATTGCTTGGAAAGATTATGAGGCTTGATGTAGACAACATTCCAAGTGCATCAGAAGTTAGTAAACTTGGACTTTGGGGTAGCTACTCTATTCCTAAGGATAATCCGTTCAGCGAAGATAAAGACTTAGAGCCAGAAATATGGGCCTTGGGATTAAGAAATCCTTGGCGATGCAGTTTTGATTCAGAAAAGCCTTCCTACTTTTTTTGTGCAGATGTTGGACAGGATATTTATGAAGAGGTGGATCTCATCACAAAAGGTGGAAACTATGGCTGGCGTATTAAAGAGGGACCTTATCCATTCATTACTACAGACTCACCCGGAGGCAATACGTCCCTTAAATCCATAAATGCAATTCCCCCCATAGCAGGATACAACCATTCCCAAATAAACAAGAATGAAGGTTCAGCTTCGATTACTGGGGGATATGTTTACCGATCCACGACTGATCCTTGCATGTTTGGACGGTACCTGTATGGTGATCTTTACGCGGGTGCAATTTGGGCCGCCACTGAAGACCCTGAAAACAGCGGAAATTTCACGAATAGCAAAATCCCTTTCGACTGTGCACATGATTCTCCTATACCATGTGACTCAGGACCAGGTAGCCTTCCAGCTTTGGGATACATCTTTTCATTTGGACAAGACAACAAGAAAGATGTTTATATTCTTGCAAGTAGTGGCGTTTACCGAGTTGTTCCTCCAAGTCGCTGCAATTACACTTGTTCACTTGAAAAGGCGTCAACAGCTTCTCCTCCTTCTCCCTCTCCGTCTTACGCAAGCCATTTGAGTAACTTCAATGGATATCTGTTTCTGCAGCTTTCATCTTTGTTGTTGATTTTGATGAGTTTTATATAG 2091 0.4094 MKTVISIGFLFCCSLLFLLLDSSTSLPLCVDSRAPFTLNNTTLKFCPYNGSTCCNSIQDAQIQKQFQQMNVSDTACSSLLKSILCARCDPYSGELFTIQSTTRSVPLLCNSAIPANSSQSKASLDDFCSQVWDTCQTVSIINSPFSPSLQGGGGGLPANKNATKLNELWQSKTDFCKAFGGASNNESVCFEGEPVALNNTDTPVIPPHGLCLEKIGNGSYLNMVAHPDGSSRAFFSSQMGKVWLATIPEEGSGGQLELDESSPFVDLTDQVYFDTQFGMMGMTFHPNFANNGRFFASFNCDKDKWSGCNGICSCNSNVNCDPSKIGPSNGAQPCQYQTVIAEYTANGTASNPSSAESAKPTEVRRIFTMGLPFTSQHAGQILFGPDDGYLYFMMGDGGGSGDPYNFSQNKKSLLGKIMRLDVDNIPSASEVSKLGLWGSYSIPKDNPFSEDKDLEPEIWALGLRNPWRCSFDSEKPSYFFCADVGQDIYEEVDLITKGGNYGWRIKEGPYPFITTDSPGGNTSLKSINAIPPIAGYNHSQINKNEGSASITGGYVYRSTTDPCMFGRYLYGDLYAGAIWAATEDPENSGNFTNSKIPFDCAHDSPIPCDSGPGSLPALGYIFSFGQDNKKDVYILASSGVYRVVPPSRCNYTCSLEKASTASPPSPSPSYASHLSNFNGYLFLQLSSLLLILMSFI 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04120 696 SUPERFAMILY Soluble quinoprotein glucose dehydrogenase 197 515 IPR011041 -
Trre15g04120 696 Gene3D - 216 626 IPR011042 -
Trre15g04120 696 Pfam Glucose / Sorbosone dehydrogenase 232 575 IPR012938 -
Trre15g04120 696 FunFam HHIP-like 1 214 638 - -
Trre15g04120 696 PANTHER HEDGEHOG-INTERACTING PROTEIN 59 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04120 Trre-Chr15 51710465 51713620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04120 - - gmx:100778890 1116.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04120 15 51710465 51713620 Trre15g04120 15 51710465 51713620 ECH