Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04119 ATGTCTCACGGATCTTCTTCTCCGCTTCCCGCCGACCGATCATCGCCGTCGCCGGAACAAGATTCTCAAAAAGAGGAACAACCACCCGCCGCCGCTCCTCTTCCTCCGACCACAAGAAGCAACCGTCCTTCCCGCGCGTGCACGATTCGTGCCGCTTCACGTCTTTATACCTCGCAGCCGGTAATTGAACGGAAACCGAAGAAACGGGAGAGGAGGCGGGAGGTGCAGGAGGAGGAGGAGGACGAAGAGGAGGAGAGGGAAGAGTCTCCTCCGACGCAATGTAGTAAGATCGTTACTCCGCTGGTTGAACCGCCTTCTGAATCGCAGTTGCCACGGTGGAATCTTCGGTCTATGTGGGAGTTAGCTTCCGTACTCAATTTCTTGAATTTATTTAGGCCTTTGTTGAATATCTCACTTGAATTTTCTGCTGAAGAGTTTGAGACTGCACTTCTTAACCCCAATGACACTTTGTTTTACATTCACATGCCTTTGTTGAAGGCAATCCCTCCTATTACACGAATGGCACTCACACGCGATACATGGATAACTGTATTATGCAGAAAATTGAGAGATTGGTGGCATTGGGTTGCTGAGGGGGATCTTCCAATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAATCACTTGATCCAGCCGTCCGTGTTATCATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAATTATATTGACAACTCAATCAAACATGGTGTTCAACTTTCAACATTCCGTAAAGAGCGTATTGGGGGTGATTCAAATGGAATTTCTTATTGGTATGAAGATGACCCCATGATTGGCCATAGGTTGTATCGAGAAATAAGGAAAACTGAAGTAACTCAACCAAGGAAAGGGAAACCGAGAGGTTCACAGGTTCTTTCTAGTACATCATACCAGTGGGAAGCAGTTGCTACCAATTTTGATGAGTTTCAAGACGTTTCTGAGAAACTTTTCTCAAGTAAAAACAGAACAGAGACTTCTGTGGGCAAAAAGCTGAAGATAGACATGCTTCCTGAAATTGAGAAAGTTCACAAGAAAAAGGAGCGGTTGCTGAAAAAGCAACACAGAGAAGCTCTTCTTCTTGATAATTACTTGATTGCTGATGGAATTTCTGCTGGGCGTGCACTTCGTGACAGGAAACCTGTAACTTATACTTTTGATGATTATGATCGATCCATCAATGAGGCAATTAAAGTAACCAAGAGGAAACAGTCATCCCCAGATCCTATGCCTAGGAGAGAACCGGTAGCAAAACCTGAAGCTCTGACTAATGGTAACCATGGTCCTTCACATGCTGCACAACATCAGAATTTCGGTATCTCATCTCCAGAATCACTTGACTCTGACGACGATGACGATGATGAATATGATAATACTGACAATTTGGACCGAAGTGGTCGTCGGAGAAGGAAACCCAAGCGGTATTCAGGGAATGAGTTTGTTGAAGAAGTATCAGATTATGAGCCAGAATTTGACAGTGATGATGATATTGTTGGAGAAGTTGTATATGATGAAGAATATCTCAAGAAACGCAAGCAGAGAAGGAAGCATTCTAGTAGCTCTGAAGGAGATGAAGAATATCAATGGGATGATGATAATGTAGAAGAGGAAGAAGAGGAGGAGGAAGAGGATGAAGACTCGGCAAGCATGAGTGAGGATAGTGACAAACCCCGCAAAGTCAAACGATTGCCAGGCCGAACTAGGAGAGAAACTAAACTGAGGTCTGTGGGTAATATTCAGTCAAGTCCAAGACGCAGTAAGAGGGCTACTAGAAATCGTATAAATTACAAACAATATGAGTTGTCGGATTCAGAAACCGAGTTTACCAAACCTGGGAAGTCTAATGCATCGGCTGATCACTCAGATCCCAGCGAGAATGAGAATGAAAATCAGAATGAGAATGAGAATGGAGACTATGTGATGGAAAGTGAAGATTCAGATAGCATTGAAGATGAAGATCAGAAAATGAAGGTAGAAGAGCCTGTTAGTGTTCCTTACCCTGTAGTAGAAGAAGAGAATGAAGATCAGACAATGAAAGTAGAAGAGCCTGTTAGTCCTCCTGCTCAAGATGAAGTTGAGGGCACGGGAAAAAGACGTTTCCTTGATTTGAATGAGCTTGCTCCTAGCCCTGGTTTTGACGATGGTCCAAATACCATAGTAAAAGATGAAGACAACGATTACTGA 2220 0.436 MSHGSSSPLPADRSSPSPEQDSQKEEQPPAAAPLPPTTRSNRPSRACTIRAASRLYTSQPVIERKPKKRERRREVQEEEEDEEEEREESPPTQCSKIVTPLVEPPSESQLPRWNLRSMWELASVLNFLNLFRPLLNISLEFSAEEFETALLNPNDTLFYIHMPLLKAIPPITRMALTRDTWITVLCRKLRDWWHWVAEGDLPIVASHGAEIEVYKSLDPAVRVIILKALCDIRVEQEDIRNYIDNSIKHGVQLSTFRKERIGGDSNGISYWYEDDPMIGHRLYREIRKTEVTQPRKGKPRGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSKNRTETSVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYLIADGISAGRALRDRKPVTYTFDDYDRSINEAIKVTKRKQSSPDPMPRREPVAKPEALTNGNHGPSHAAQHQNFGISSPESLDSDDDDDDEYDNTDNLDRSGRRRRKPKRYSGNEFVEEVSDYEPEFDSDDDIVGEVVYDEEYLKKRKQRRKHSSSSEGDEEYQWDDDNVEEEEEEEEEDEDSASMSEDSDKPRKVKRLPGRTRRETKLRSVGNIQSSPRRSKRATRNRINYKQYELSDSETEFTKPGKSNASADHSDPSENENENQNENENGDYVMESEDSDSIEDEDQKMKVEEPVSVPYPVVEEENEDQTMKVEEPVSPPAQDEVEGTGKRRFLDLNELAPSPGFDDGPNTIVKDEDNDY 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04119 739 MobiDBLite consensus disorder prediction 640 661 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 410 487 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 537 562 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 517 739 - -
Trre15g04119 739 Coils Coil 65 88 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 1 98 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 37 55 - -
Trre15g04119 739 PANTHER REMODELING AND SPACING FACTOR 1 38 733 IPR028938 GO:0006355|GO:0031213
Trre15g04119 739 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 214 244 IPR028942 -
Trre15g04119 739 MobiDBLite consensus disorder prediction 1 24 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 61 76 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 457 471 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 410 427 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 517 536 - -
Trre15g04119 739 MobiDBLite consensus disorder prediction 439 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04119 Trre-Chr15 51691816 51698678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04119 - - gmx:100795519 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04119 15 51691816 51698678 Trre15g04119 15 51691816 51698678 ECH