Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04115 ATGATGACGACGACAACGAAGAGAGCAAGAACAACAACAAAGGTACAAACCTTGTTCTTCTCTGTATGTAGACAAAGATCCTTTCACATTCTCATCATCATCGCTATTTTCTATGTTCTTCTATTCACTCTCGAAATCCCCTTTGTTTTCAACAAAACCGCCGCCACTCGTTCCGAAAGAAACGCTTTAGAACAACAACAACAGCTTCAACCGAGTCAGACGATTCAACTCACTCGCCGCCGAAACAATCAAAGTTTGATTCTATCTGGATTAGTCCTAAACGACGCCGCATTTGAATCCGAAGTTTATCAATCAGCTTGTCGAGTTGGTAAAAGGGTTTGGGAAGAACTTCAATTAGCGAAAACCCCAGTTCAAAACGGTGTCGTTTTGAAACCTGATAATTTAACCGGGTTATGCCCGCGTTCTGTTTGGATTACCGGGTCGGATTTTGTTGGGAATGGTAGTTTGATGTTGATTCCTTGTGGGTTGACGTTAGGTTCACATATAACGGTCGTTGGGAAACCTTTGAGAGATGGGGATGGGAAAAAGTCTCAGTTTGTGATGGAATTGCAAGGTTTGAAAAGTGTTGAAGGTGAAGAGCCACCTAGGATATTGCATTTCAATCCTAGATTGAAAGGTGATTGGAGTGGTAAACCTGTTATTGAGCTTAATACTTGTTATAGGATGCAGTGGGGTACTTCTTTGCGTTGTGATGGTTGGAAATCTAGGGCTGATCAAGACACTGTTGATGGACTGGTTAAGTGTGAGAAGTGGATTGGGGGAGAATCGGGAGATGATAGGCAAGCGGTGGAGTCTAAATCAGAATGGTGGTTGAAGAGACTCATAGGTCGGACAAAAAAAGTAACAGTTGATTGGCCATTCCCATTTAACGAGAATAAGCTATTTGTTCTTACGCTTAGTGCTGGATTGGAGGGCTATCATTTTAATGTTGATGGGAGGCATGTGGCCTCTTTTCCTTATCGCACTGGCTTTACTCTTGAGGATGCTACTGGACTCACTGTAAAAGGAAATATTGATGTACATTCTATATTTGCTGCCTCCTTGCCTTCAACGCATCCTAGTATTTCGCCACAGCAGCACCTTGAATTTTCAACCAGATGGCGTGCCCCACCACTACCTGAGTTTGGCGTGGAATTGTTCATCGGCATCCTATCAGCTGGAAACCATTTTGCTGAGCGGATGGCTGTGAGAAAGTCATGGATGCAGCATAGCCTTATCAAATCTTCAGAAGTGGTGGCTCGTTTCTTTGTAGCACTGCACCAGAAAAAAGGAATTAATTCAGAGTTGAAGAAGGAAGCGGAATTTTTCGGAGATATTGTTATAGTGCCTTACATGGATAACTACGACCTTGTTGTGTTGAAAACAGTGGCTATATGTGAATATGGGGTTCATACAGTGGCTGCAGGGCACATCATGAAAGGCGACGATGACACGTTTGTGAAAGTGGACGCTGTTATCAACGAAGTAAGGAATGTTCCGGATTCTATGAGCTCTTATATTGGGAATATAAATTATCACCACAAACCCTTGCGCCATGGTAAATGGGCTGTGACATACGAGGAGTGGCCAGAAGAGGATTACCCACCATATGCTAATGGGCCGGGGTATATTCTGTCTTATGATATTGCACACTACATTGTTTCTGAATTTGAGAAGCATAAATTAAGGCTGTTTAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAGCACAAAACCGGTATATTATTCGCATAGCTTAAAATTCTGCCAGTTTGGTTGTATAGAAGGCTATTACACAGCTCATTACCAATCTCCAAGGCAGATGATTTGCCTTTGGGATAAATTGCAGCGGCATACAAGTCCTCAATGCTGCAACATGAGATGA 1899 0.426 MMTTTTKRARTTTKVQTLFFSVCRQRSFHILIIIAIFYVLLFTLEIPFVFNKTAATRSERNALEQQQQLQPSQTIQLTRRRNNQSLILSGLVLNDAAFESEVYQSACRVGKRVWEELQLAKTPVQNGVVLKPDNLTGLCPRSVWITGSDFVGNGSLMLIPCGLTLGSHITVVGKPLRDGDGKKSQFVMELQGLKSVEGEEPPRILHFNPRLKGDWSGKPVIELNTCYRMQWGTSLRCDGWKSRADQDTVDGLVKCEKWIGGESGDDRQAVESKSEWWLKRLIGRTKKVTVDWPFPFNENKLFVLTLSAGLEGYHFNVDGRHVASFPYRTGFTLEDATGLTVKGNIDVHSIFAASLPSTHPSISPQQHLEFSTRWRAPPLPEFGVELFIGILSAGNHFAERMAVRKSWMQHSLIKSSEVVARFFVALHQKKGINSELKKEAEFFGDIVIVPYMDNYDLVVLKTVAICEYGVHTVAAGHIMKGDDDTFVKVDAVINEVRNVPDSMSSYIGNINYHHKPLRHGKWAVTYEEWPEEDYPPYANGPGYILSYDIAHYIVSEFEKHKLRLFKMEDVSMGMWVEQFNSTKPVYYSHSLKFCQFGCIEGYYTAHYQSPRQMICLWDKLQRHTSPQCCNMR 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04115 632 Gene3D - 383 623 - -
Trre15g04115 632 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 344 580 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre15g04115 632 FunFam Hydroxyproline O-galactosyltransferase GALT2 267 351 - -
Trre15g04115 632 Pfam Galactosyltransferase 399 579 IPR002659 GO:0006486|GO:0016020|GO:0016758
Trre15g04115 632 Pfam Galactoside-binding lectin 156 351 IPR001079 GO:0030246
Trre15g04115 632 SUPERFAMILY Concanavalin A-like lectins/glucanases 157 351 IPR013320 -
Trre15g04115 632 CDD GLECT 159 351 IPR001079 GO:0030246
Trre15g04115 632 Gene3D - 156 351 - -
Trre15g04115 632 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 155 353 IPR001079 GO:0030246
Trre15g04115 632 FunFam Hydroxyproline O-galactosyltransferase 377 620 - -
Trre15g04115 632 SMART Gal_bind_lectin_2 159 352 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04115 Trre-Chr15 51658963 51662045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04115 18 632 Glycosyltransferase AT1G74800 60.270 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04115 K20843 - gmx:100800292 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04115 15 51658963 51662045 Trre15g04115 15 51658963 51662045 ECH