Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04114 ATGTCACACCGTCCTTCCCGGCGGCGAAATACAGCACCGCCGGAGACAAATCCATCTTCTGCTCCGGTAAAGCACTCAAAACCCACTATCTTCTCACCTTCACCTTCTCACTACCCAAAACCAAACCAAGATTTGATTCAAGCTACTAAATCATCTTTTTTAGTTAAACCATTTCAAAGTCTAAACTTAGGTAGCAGAAAAACAAAACAACCTCAAACAAAACATGTTGACACACGTTTATTACAAACAAAAGCTATGACAACTTCTGCTATATTTGATTCCTCAAAACCCAAAAACATAGTACAAACACCAAAAGTTGAAAAAGATGGTGTTTTTTTGAATTCCAAAAGGACCCATAAAGAGAAACCTCAAAAAACTAGTTCAGAATTGGAAAGATGGAAACTTGAGGGGTTGTTGAAGAATGAGAAGAAGGAATCTTATAAAGGGTGTGTGGTTGAAGATGTTAAGGTTGAAAAATCAAGAAAAGTTGAAGAAAGTGATGTTGTTAAGAAGAGAGTTTCAGTTTCTATGGGTCAAAGTGGTGGTAGAAGAGAATCGTTATGTGGGTCAATGATTGAGTTAGGTGATTTCTTTGCAATTAATGGTGCTAAAATGGTTTCAGCTGATATGCCACCGTTTATGCAGATCCATGCTGTTGATTGTGCTAGAAAGGCTTTTGATAGTATGGAGAAATTCACTTCCAAAACCCTTGCATCATCCCTTAAGAAGGAATTTGATGGGGTGTATGGGCCGGCATGGCACTGTATTGTGGGGACTAGTTTTGGATCATTTGTGACTCATTCTGTTGGAGGGTTTCTATATTTCTCAATGGATCAAAAATTGTACATCCTTTTATTTAAGACTGCTGTACAAAAAGCTGATTGA 885 0.3785 MSHRPSRRRNTAPPETNPSSAPVKHSKPTIFSPSPSHYPKPNQDLIQATKSSFLVKPFQSLNLGSRKTKQPQTKHVDTRLLQTKAMTTSAIFDSSKPKNIVQTPKVEKDGVFLNSKRTHKEKPQKTSSELERWKLEGLLKNEKKESYKGCVVEDVKVEKSRKVEESDVVKKRVSVSMGQSGGRRESLCGSMIELGDFFAINGAKMVSADMPPFMQIHAVDCARKAFDSMEKFTSKTLASSLKKEFDGVYGPAWHCIVGTSFGSFVTHSVGGFLYFSMDQKLYILLFKTAVQKAD 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04114 294 FunFam Dynein light chain 195 289 - -
Trre15g04114 294 Pfam Dynein light chain type 1 204 288 IPR001372 GO:0007017|GO:0030286
Trre15g04114 294 CDD DLC-like_DYNLL1_DYNLL2 207 288 - -
Trre15g04114 294 PANTHER DYNEIN LIGHT CHAIN 202 288 IPR001372 GO:0007017|GO:0030286
Trre15g04114 294 MobiDBLite consensus disorder prediction 1 50 - -
Trre15g04114 294 SUPERFAMILY DLC 201 288 IPR037177 GO:0007017|GO:0030286
Trre15g04114 294 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 199 289 IPR037177 GO:0007017|GO:0030286
Trre15g04114 294 SMART Dynein_light_2 198 288 IPR001372 GO:0007017|GO:0030286
Trre15g04114 294 MobiDBLite consensus disorder prediction 11 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04114 Trre-Chr15 51639491 51640809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04114 - - aprc:113847721 326.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04114 15 51639491 51640809 Trre15g04114 15 51639491 51640809 ECH