Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04099 ATGGACGCCACTCTTCGCATTTTCTGCGTCGGAACCCTAGACACCAAGCTCAACGAACTCCGTTTCCTCTCCGATTCACTTCGATCCAATCTCCACCGCTTCTCCAATCAAACTTCCCCCAAACTTGATATCGTCGTCATTGATGTTTCCACCGGTCCAAACGAACCAAAACCTTTACCAGATTTCACATTCGTTTCAAGAAACGATGTTATCTCATCCTACCAATCCACGCTTCTTCCAAAACACAGAGGCAAAGCCGTTACCGTTATGAGCCAAGCGCTTAAACATTTCTTGCAGAAATCTAACTCCGATGGTAGTGTCGCCGGCGTTATCGGTGTCGGCGGTAGTGGAGGTACATCGCTTTTGTCATCTCCTTTCACATCTCTTCCGATCGGGATCCCTAAGCTCATTGTGTCAACCGTTGCTAGTGGCCAAACGGAACCGTATGTTGGAACTTCTGATTTGGTGTTGTTTCCTTCTATTGTTGATGTTGCCGGCGTTAATAGTGTTAGTAGGGTGGTTTTTTCCAATGCTGCTGCTGCTTTCGCTGGAATGGTTGTTGGAAGGATTCAGAGTTTGAGTGATTCTTCTAAACTTGTTGATAAACCTACTGTTGGTATAACTATGTTTGGGGTTACTACTCCTTGTGTTGATGCTGTTAGAGATAGGTTGCTTCGAGAGGGTTATGAGAGTTTGGTTTTTCATGCAACTGGGGTTGGTGGTAGGGCTATGGAGAATTTGATTAGAGAGGGATTTATACAGGGTGTTTTGGACATCACAACAACAGAGGTAGCAGACTATATAGTTGGAGGCGTAATGGCTTGCGACAGTTCTCGCTTTGATGTCATAATAGAGAAGAAAATCCCCCTGGTCCTTAGTGTGGGAGCATTAGACATGGTGAACTTTGGAGCAAAAGATACCATACCTCAGAATTTTCAGCAGAGAAATATATATGAGCACAATAAGCAGGTTTCACTTATGCGAACAACAGTGGATGAGAACAGAAAAATTGCTGATTTCATAGCAAATAAACTGAACAGTTCATCATCTAAGATTTGTGTTTGCCTTCCAGAAAAGGGTATATCTGCTTTAGATGCACTGGGTAAGCCTTTTTATGATCCAGAGGCAACTGGTACACTTCTTCATGAATTACAGAGGCTTATCAAGACTGATGATGTTCGACAGGTGAAGGTGTATCCCCATCATATTAATGACCTTGAATTTGCAAATGCACTAGTTGATGCATTTTTAGAGGTTAATGAGAAAACTGGTCAAGATTCTACTCATCCACCAGTAGCCATTCCTGAATCAGTTGAACACTTCCATGAGGATTCTGTTTCAAACAAATCAAGCTTTGGGCCCATTATCTATGCACCTTGTGAATTCCCAGATGCAAAACCAGAAACTTTGGAGAAAACACAGCTAATATTACAGCAATTTAAATATCAAATAGATAAAGGAATTCCTATAATAGGAGCTGGTGCTGGGACTGGGATATCTGCCAAGTTTGAAGAAGCTGGAGGAGTTGATTTAATAGTATTGTACAACTCAGGGCGCTTCCGGATGGCTGGGAGAGGTTCATTAGCAGGGTTGTTACCATTTGCTGATGCTAATGCTGTTGTCCTTGACATGGCCAATGAAGTTTTACCAGTGGTAAAGAAGGTACCTGTTCTTGCCGGTGTATGTGCAACTGATCCCTTCCGACGAATGGATCACTTCCTTAAACAGGTGGAGTCTACTGGATTCTCTGGGGTACAAAATTTTCCAACTGTTGGGTTGTATGATGGTAATTTTAGGCAAAATCTTGAAGAAACAGGAATGGGTTACAGCTTGGAAGTGGAGATGATCCAAAAAGCCCATAAAATGGGTCTCTTGACAACTCCATATGCATTCAATCAACATGAAGCTATTGAAATGGCTAAAGTTGGCGCCGATATTATTGTAGCCCACATGGGTCTAACCACAACAGGCTCCATAGGTGCAAAAACAGCTGTTTCACTTGACGAAAGTGTAGTTCTTGTACAAGCTATTGCAGATGCAGCACATAGGATCAATCCTAATACTATTGTGCTGTGCCATGGAGGCCCGATTTCTGGTCCACAAGAGGCAGAATTTATATTGAAGAGAACCAAAGGAGTCCATGGTTTTTATGGGGCTTCAAGCATGGAAAGACTACCAGTGGAGCAGGCTATCACAAGTACAGTCAAACAATACAAGTCAATTTCAATTCGTTGA 2235 0.4255 MDATLRIFCVGTLDTKLNELRFLSDSLRSNLHRFSNQTSPKLDIVVIDVSTGPNEPKPLPDFTFVSRNDVISSYQSTLLPKHRGKAVTVMSQALKHFLQKSNSDGSVAGVIGVGGSGGTSLLSSPFTSLPIGIPKLIVSTVASGQTEPYVGTSDLVLFPSIVDVAGVNSVSRVVFSNAAAAFAGMVVGRIQSLSDSSKLVDKPTVGITMFGVTTPCVDAVRDRLLREGYESLVFHATGVGGRAMENLIREGFIQGVLDITTTEVADYIVGGVMACDSSRFDVIIEKKIPLVLSVGALDMVNFGAKDTIPQNFQQRNIYEHNKQVSLMRTTVDENRKIADFIANKLNSSSSKICVCLPEKGISALDALGKPFYDPEATGTLLHELQRLIKTDDVRQVKVYPHHINDLEFANALVDAFLEVNEKTGQDSTHPPVAIPESVEHFHEDSVSNKSSFGPIIYAPCEFPDAKPETLEKTQLILQQFKYQIDKGIPIIGAGAGTGISAKFEEAGGVDLIVLYNSGRFRMAGRGSLAGLLPFADANAVVLDMANEVLPVVKKVPVLAGVCATDPFRRMDHFLKQVESTGFSGVQNFPTVGLYDGNFRQNLEETGMGYSLEVEMIQKAHKMGLLTTPYAFNQHEAIEMAKVGADIIVAHMGLTTTGSIGAKTAVSLDESVVLVQAIADAAHRINPNTIVLCHGGPISGPQEAEFILKRTKGVHGFYGASSMERLPVEQAITSTVKQYKSISIR 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04099 744 CDD Tm-1-like 6 418 IPR044122 -
Trre15g04099 744 Gene3D Uncharacterised protein family UPF0261, NN domain 1 192 - -
Trre15g04099 744 Gene3D Uncharacterised protein family UPF0261, NC domain 202 422 - -
Trre15g04099 744 PANTHER UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) 1 744 - -
Trre15g04099 744 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 474 664 IPR015813 GO:0003824
Trre15g04099 744 Gene3D Aldolase class I 468 719 IPR013785 -
Trre15g04099 744 Pfam Uncharacterised protein family (UPF0261) 6 419 IPR044122 -
Trre15g04099 744 Pfam Phosphoenolpyruvate hydrolase-like 476 741 IPR009215 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04099 Trre-Chr15 51526306 51531688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04099 - - gmx:100792647 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04099 15 51526306 51531688 Trre15g04099 15 51526306 51531688 ECH