Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04096 ATGGATTTAACACAAGTACTACACATGAAAGGAGGTGTCGGAGAAGAAAGCTATGCAAACAACTCCTCACTTCAGCGAAAGGCGATTTCATTGACAAAACCATTGAGAGAAGAAGCCATAACAAACCTATACCGCAATTCAGTTCCTAGAAGCTTGGGAATTGCAGATTTGGGTTGTTCTTGTGGACCAAACACTTTTTTGGTGATCTTTGAAACAATCAAGGTTGTCGAAAAGCTTTGTCACGAAATGAACCATAACCCCCCCGAATATAAGATCTTTTTGAACGATCTACCGGGAAATGATTTCAACAATATATTTCAGTCCCTCAACACCTTTAAAGAAAATCTACGCAATGAAATAGAAACTGAAATGGGTCCTTGCTACTTCTTTGGGGCTCCAGGTTCCTTTTATGACAGAATATTTCCAGATAAAAGTATGCATTTTGTCCATTCCTCTTATAGCCTTCAATTTCTATCTAAGGTCCCGGAGGGTGTAGAGAACAACAAAGGCAACATTTACTTGTCTAGCACAAGTCCCTCAAGTGTTATTAATGCTTACTATGAGCAATATAAAATAGATTTCTGTCATTTTCTCAAGTGTCGTGCCCAAGAATTACTTGAAGGAGGACGTCTATTTGTAACTTTAATTGGAAGACAAAGTGAGGAGCCATGGAGCAAGGACTGTTGTTACATTTGGGAACTTATGGCTACTGATCTTAATGATATGGTCTCCCAGGGAATCATAGAAGAAGAAAAAGTCAACAGTTTCAACCTCCCTGTCTATTATCCATATCCATCCGAAGTGAAGTCCGAAATTCTCAACGAAGGATCATTTGACATGGATCAATTGGATGTTTGTGAAGTAAATTTTTATGAACTTGATAAAGGATTTAATACTGCACAATGCACAAGGGCTGTGGCTGAACCTTTACTAGTTAGTCATTTTGGTGATAGTGTCACTAAAGAGGTTTTTAACCGCTTTCAAAAAAGTGTAAATGATCACATGTCCAAAGAGGGGACTAAAATCACCAATATTACCATGGTATTGACTAGAAAGCCATAA 1062 0.3804 MDLTQVLHMKGGVGEESYANNSSLQRKAISLTKPLREEAITNLYRNSVPRSLGIADLGCSCGPNTFLVIFETIKVVEKLCHEMNHNPPEYKIFLNDLPGNDFNNIFQSLNTFKENLRNEIETEMGPCYFFGAPGSFYDRIFPDKSMHFVHSSYSLQFLSKVPEGVENNKGNIYLSSTSPSSVINAYYEQYKIDFCHFLKCRAQELLEGGRLFVTLIGRQSEEPWSKDCCYIWELMATDLNDMVSQGIIEEEKVNSFNLPVYYPYPSEVKSEILNEGSFDMDQLDVCEVNFYELDKGFNTAQCTRAVAEPLLVSHFGDSVTKEVFNRFQKSVNDHMSKEGTKITNITMVLTRKP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04096 353 Gene3D - 6 338 IPR042086 -
Trre15g04096 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 352 IPR029063 -
Trre15g04096 353 Pfam SAM dependent carboxyl methyltransferase 38 351 IPR005299 GO:0008168
Trre15g04096 353 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 8 338 IPR005299 GO:0008168
Trre15g04096 353 Gene3D Vaccinia Virus protein VP39 21 289 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04096 Trre-Chr15 51495464 51499651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04096 K21483 - gmx:100813166 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04096 15 51495464 51499651 Trre15g04096 15 51495464 51499651 ECH