Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04077 ATGGCTTCTTGTATATCTACTCCTTCACCTTCTTCCAGATTACAACTCACCAGAAAAAGCTTCATTGCTTCACCTTCATTCCCTCTCTATCACCGAAGTAAGTGTGAATTGAACAGAAGGAGTTTAGCATTTAAAGGAATTATGGCAACTGGAGTTTCAGTAATGGCTTCCACTCTTACTTCACAAGCTCAACCATCTCAAGAGAAGGAACTCGAAAGATTAGCATACAAACCAGAAGGGTACAATTATTGGAAGTGGAGGGATCATAAAATTCACTATGTTGTGCAAGGAGAAGGCCCTCCTGTTGTCCTTATTCATGGTTTTGGTGCATCTGCTTTCCACTGGAGATACAACATTCCAGAATTGGCTAAGAAACACAAGGTTTATGCCTTAGACTTGCTTGGATTTGGGTGGAGTGAAAAAGCACTCGTTGATTATGATGCCTTGGTGTGGAGGGATCAAGTCGTGGACTTCTTGAAGGAAATTGTAAAGGAACCTGCAGTTTTGGTTGGAAATAGCCTTGGAGGAATTACTGTTTTGATCGCAGCAACTGCGTTGCCTGAGTTTGTCAGTGGGGTTGCTCTGCTGAATTCTGCAGGACAATTTAGTGATGGAAAGGAACCTAAAACTTCCGAGGAAACACCTCTACAAAAGTTTTTCCTAAAACCTTTGAAGGAAGTTTTCCAGCGTGTAGTTGTTGGATTTATATTTTGGCAATCAAAGCAACCCGCTCGGATTGAATCAGTCTTAAAAAGTGTGTATGTAAACTCTTCCAATGTAGACGACTATCTTATTGAATCTATAACCAGGCCAGCTCAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGCTTCATGGCGAATCAAAGCACGTACACTCTAGATTCCTTGTTAAGTGATCTCTCTTGCCCGTTGCTTCTGCTATGGGGTGACCTTGACCCATGGGTTGGTCCAGCCAAAGCTAACAGAATCAAAGAGTTTTATCCAAAATCAACACTTGTTAACTTGCAAGCCGGGCATTGCCCACACGATGAGGTACCCGAGCTTGTGAACAAGGCTTTATTGGATTGGCTCGCCACCCTTACTCCACCACAAGTGACTCTCCAAAGAGTTTGA 1125 0.4284 MASCISTPSPSSRLQLTRKSFIASPSFPLYHRSKCELNRRSLAFKGIMATGVSVMASTLTSQAQPSQEKELERLAYKPEGYNYWKWRDHKIHYVVQGEGPPVVLIHGFGASAFHWRYNIPELAKKHKVYALDLLGFGWSEKALVDYDALVWRDQVVDFLKEIVKEPAVLVGNSLGGITVLIAATALPEFVSGVALLNSAGQFSDGKEPKTSEETPLQKFFLKPLKEVFQRVVVGFIFWQSKQPARIESVLKSVYVNSSNVDDYLIESITRPAQDPNAGEVYYRLMTRFMANQSTYTLDSLLSDLSCPLLLLWGDLDPWVGPAKANRIKEFYPKSTLVNLQAGHCPHDEVPELVNKALLDWLATLTPPQVTLQRV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04077 374 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 32 364 - -
Trre15g04077 374 PRINTS Alpha/beta hydrolase fold signature 125 140 IPR000073 -
Trre15g04077 374 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Trre15g04077 374 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
Trre15g04077 374 SUPERFAMILY alpha/beta-Hydrolases 82 361 IPR029058 -
Trre15g04077 374 Gene3D alpha/beta hydrolase 77 363 IPR029058 -
Trre15g04077 374 FunFam Alpha/beta fold hydrolase 79 364 - -
Trre15g04077 374 Pfam Alpha/beta hydrolase family 102 355 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04077 Trre-Chr15 51289973 51293195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04077 101 351 Acyl Lipid Metabolism Gene Families AT3G10840 24.262 3.39e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04077 - - gmx:100776976 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04077 15 51289973 51293195 Trre15g04077 15 51289973 51293195 ECH