Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04075 ATGGCGGCGGAATCATCGGAGGGTGAAGAAGAAGGAAAGTTAACCGGAGGTAACCAAGTTTTGATCGTCGATGAAGACCTCCGTGAATTAGGCAAAAAAGCCGCCTGGAGTGTTAGCTCCTGCAAAACCGGTAACGGCGTTTCTTCTCTTCGTGATGACAATCTCGAAACCTATTGGCAATCTGATGGTGCTCAACCTCATTTTGTTAACATTCAATTCCAAAAGAAAGTTCGATTACAATTAGTTGTGCTATATGTGGATTTCAAGCTTGATGAGAGTTATACACCGAGTAAGATTTCCATTCGCGCCGGAGATGGCTTTCATAACCTCAAGGAGATAAAAGCTGTGGAACTTGTGAAACCAACTGGTTGGCTTTATCTCTCATTATCTGGACTTGATCCTCGTGAAACTTTTGTCAACGCATTTATGTTGCAAATTGCTGTTTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTACGGACCTAGACCGAACCCCATTCCACAGCAGCCATTTCAATTTACTTCAAGAGAGTTCATCACCTACTCTACTATAAGATGA 579 0.4266 MAAESSEGEEEGKLTGGNQVLIVDEDLRELGKKAAWSVSSCKTGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGLDPRETFVNAFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTIR 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04075 192 Pfam Anaphase-promoting complex, subunit 10 (APC10) 21 189 IPR004939 -
Trre15g04075 192 ProSiteProfiles DOC domain profile. 6 192 IPR004939 -
Trre15g04075 192 CDD APC10 28 167 IPR016901 GO:0005680|GO:0031145
Trre15g04075 192 SMART APC10_2 27 191 IPR004939 -
Trre15g04075 192 PIRSF APC10 2 192 IPR016901 GO:0005680|GO:0031145
Trre15g04075 192 PANTHER ANAPHASE-PROMOTING COMPLEX 10 19 192 IPR016901 GO:0005680|GO:0031145
Trre15g04075 192 SUPERFAMILY Galactose-binding domain-like 22 168 IPR008979 -
Trre15g04075 192 Gene3D - 1 169 - -
Trre15g04075 192 FunFam Anaphase-promoting complex subunit 10 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04075 Trre-Chr15 51267411 51269132 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04075 K03357 - sind:105176098 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04075 15 51267411 51269132 Trre15g04075 15 51267411 51269132 ECH