Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04063 ATGGTGAATCTTGTGGCAGCACAAAAACCATTGATGCATGGCCTAATGAAAATGGCAGGTATAAGACCCTACACAGTAGAGATAGATTCAGGAACAACAATGAGTTTTTGGGTACCTTCAGAAACCATAACAAAGCCAAAGAAAAAAGAAGAAAAACCTCAAATAATCGCAAAGCCGAATAAACCCGTGGTTGTTTTAGTCCATGGTTTTGCCGCGGAAGGAATAGTGACGTGGCAATTTCAAGTTGGCGCGTTAACAAAAAAATACTCTGTCTATATACCGGATCTTCTATTTTTTGGAGGATCCGGTACAGACAGATCGGAACGGTCTCCGAAATTTCAAGCAGAGTGTTTAGTGACAGCATTGAGGAAACTTGGTGTTGAAAAATGTATCATTGTTGGTTTTAGTTATGGTGGAATGGTTGCATTTAAAATGGCTGAAATGTATCCTGAATTGGTTCAAGCTATAGTTATATCAGGATCTATTTTGGCTATGACTGATTCAATTAGTGTTAGTTCATTGCAAGAACTTGGATTTTCTTCTTCTTCTGAGCTTTTGTTGCCTAATTCTGTTAAGGGTCTTAAAGCACTTTTATCTGTTGCTGCTTATAAAAAGCTTTGGTTTCCTGATCGTTTACATAAAGACTTTCTTGAGGTGATGTTCACGAATAGAAAGGAGCGAGGTGAGCTATTAGATGGGTTAGTAATTAGTAATAAAGACATCAACATTCCAAATTTTTCACAGAGAATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAAATATGAAAGAGCAACTAGGAGATGGCACAACGTTTGAAGGCATAAAGAAAGCTGGCCACCTTGTTCACTTGGAGCGACCATGTGTCTACAATAGATGCCTCAAGAAGTTTATTGCTTCCTTCTTGGCTTCAAATGAAGCCAAATAA 948 0.3776 MVNLVAAQKPLMHGLMKMAGIRPYTVEIDSGTTMSFWVPSETITKPKKKEEKPQIIAKPNKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYIPDLLFFGGSGTDRSERSPKFQAECLVTALRKLGVEKCIIVGFSYGGMVAFKMAEMYPELVQAIVISGSILAMTDSISVSSLQELGFSSSSELLLPNSVKGLKALLSVAAYKKLWFPDRLHKDFLEVMFTNRKERGELLDGLVISNKDINIPNFSQRIHLLWGENDQIFKLELAQNMKEQLGDGTTFEGIKKAGHLVHLERPCVYNRCLKKFIASFLASNEAK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04063 315 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Trre15g04063 315 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Trre15g04063 315 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Trre15g04063 315 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Trre15g04063 315 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Trre15g04063 315 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Trre15g04063 315 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Trre15g04063 315 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Trre15g04063 315 PANTHER SI:DKEY-122A22.2 1 306 - -
Trre15g04063 315 Pfam alpha/beta hydrolase fold 62 175 IPR000073 -
Trre15g04063 315 SUPERFAMILY alpha/beta-Hydrolases 59 306 IPR029058 -
Trre15g04063 315 Gene3D alpha/beta hydrolase 7 308 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04063 Trre-Chr15 51138412 51147970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04063 62 157 Acyl Lipid Metabolism Gene Families AT4G02340 31.313 5.10e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04063 - - gmx:100816070 525.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04063 15 51138412 51147970 Trre15g04063 15 51138412 51147970 ECH