Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04053 ATGTGGCGAAGAAGGTTTAGCACCACCGTCTCCGGCACCGCAGCCGCATTGAAAGACAAAAAATGGGACGCACTAATTATCGGCGGCGGCCATAACGGTCTCACAGCAGCAGCTTACCTCGCCCGTGGAGGCCTCTCAGTTGCTGTCCTCGAACGCCGCCATATAATCGGCGGCGCCGCCGTAACAGAGGAGCTAATTCCTGGCTTCAAGTTTTCTCGTTGCAGTTACCTCCAAAGCCTTCTCCGACCTGCAGTTATCAATGAGCTGGATTTGGCAAAACACGGATTGAAGCTTCTGAAGAGAAATCCTTCGTCGTTTACGCCTTGTCTCGATGGGCGCTACCTTCTCTTAGGACCTGATAAGGATCTTAATCATTCTCAGATTTCCAAATTCTCAAAAGCTGATGCAGAAGCTTATCCAAAATATGAGAGTCAGCTTGAGAACTTCTGTAAATTCATGGATCTAGTGCTGGATTCGTCTCCACCTGAATCTTTGCAACATAAATCATCTCTTAACGAACAACTGAAGAATAAATTACAGAATTCAGTATTTTGGGCTAGTTGTTTGCGGCATGCAGCCTCCATGGGGCAAAAGGATATGGTGGACTTTATGGACCTTTTGTTGTCCCCAGCTTCTAAAGTTTTGAATAACTGGTTTGAGGCAGATGTTCTGAAGGCAACACTTGCAACAGATGCTGTGATAGGATCTACAGCCAGTGTCCACACCCCGGGAAGTGGTTATGTTCTGCTACATCATGTAATGGGTGAAACTGATGGAGAACGTGGAATTTGGTCATATGTTGAAGGTGGAATGGGCTCAATATCCAAGGCTATTGCTAGTGCTGCTGTGGCAGCTGGAGCACATATTGCAACGGATGCTGAGGTGTCTCAGTTGTTGATTAAAAACTCAAGCACTGTCAATGGGGTGGTTCTGGCTGATGGTACCGAAGTGCATGCTTCAGTTGTTCTGTCTAATGCAACACCTTATAAAACTTTCATGGATTTAGTCCCCAACAATGTCCTCCCTGATGATTATTTCCGGGCAATTAAGCACTCTGACTACAGCTCTGCCACAACAAAAATAAATGTAGCAGTTGATAAATTGCCCCAATTTAAGTGTTGCAAGTTAGACCATTCGCAAGCTGGCCCAGAGCATGTTGGCACTATTCATATAGGTTCAGAGAGTATGGACGAGATTCATTCTGCATCTGAAGATGCGGTGAATGGAATACCATCAAGAAGACCGGTCATTGAGATGACGATTCCTTCCGTATTGGACAAAACTATATCTCCACCAGGTATGCATGTGATAAACCTGTTTGTGCAGTATACACCCTACAAACCATCGGATGGGGACTGGCAAGATCATGACTACAGAGAATCATTTTCTCAAAAGTGCTTCACATTGATTGATGAATATGCACCTGGTTTCAGCACATCAGTAATTGGTTATGACATGCTGACTCCACCAGATCTTGAAAGGGAAATCGGTTTGACAGGAGGGAATATATTCCACGGTGCTATGGGTTTGGATTCACTTTTCCTCATGCGACCTGTAAAAGGATGGTCAAACTATAAGACTCCGCTTAAAGGTTTATACTTATGCGGAAGTGGAGCTCATCCTGGCGGTGGGGTTATGGGAGCACCTGGACGAAATGCCGCCCATTTAGTTCTTCAGGATGTCAAAAAAACATGA 1695 0.4519 MWRRRFSTTVSGTAAALKDKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHIIGGAAVTEELIPGFKFSRCSYLQSLLRPAVINELDLAKHGLKLLKRNPSSFTPCLDGRYLLLGPDKDLNHSQISKFSKADAEAYPKYESQLENFCKFMDLVLDSSPPESLQHKSSLNEQLKNKLQNSVFWASCLRHAASMGQKDMVDFMDLLLSPASKVLNNWFEADVLKATLATDAVIGSTASVHTPGSGYVLLHHVMGETDGERGIWSYVEGGMGSISKAIASAAVAAGAHIATDAEVSQLLIKNSSTVNGVVLADGTEVHASVVLSNATPYKTFMDLVPNNVLPDDYFRAIKHSDYSSATTKINVAVDKLPQFKCCKLDHSQAGPEHVGTIHIGSESMDEIHSASEDAVNGIPSRRPVIEMTIPSVLDKTISPPGMHVINLFVQYTPYKPSDGDWQDHDYRESFSQKCFTLIDEYAPGFSTSVIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSLFLMRPVKGWSNYKTPLKGLYLCGSGAHPGGGVMGAPGRNAAHLVLQDVKKT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04053 564 SUPERFAMILY FAD/NAD(P)-binding domain 19 345 IPR036188 -
Trre15g04053 564 Gene3D - 223 369 IPR036188 -
Trre15g04053 564 PANTHER PHYTOENE DEHYDROGENASE 4 563 - -
Trre15g04053 564 Gene3D - 21 112 IPR036188 -
Trre15g04053 564 Pfam Flavin containing amine oxidoreductase 33 367 IPR002937 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04053 Trre-Chr15 51064805 51070469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04053 - - gmx:100781247 1010.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04053 15 51064805 51070469 Trre15g04053 15 51064805 51070469 ECH