Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04040 ATGGCTTTACTAGCTAAAAAGAAGACAGCATCAAGAGCAGCAACAACACTTATATGGCTAATCTCTTGGAGTTTTATTATGATCTATCATGTTAGTTTAGCAGAAAGTGTTTTGGAAGACGAAAAATCGGAAAATATTGTTATGAAAGAAAGACAATTCTTCTGGTATAGTGGAAAGTCTTCCTACGAACGTGTTTGGCCTGAAATGAAGTTTGGTTGGAGAATTGTAGTAGGGTCTATTGTTGGATTTTTTGGAGCAGCATTGGGAAGTGTAGGAGGAGTAGGAGGTGGAGGAATTTTTGTCCCTATGCTCACTTTGATCATTGGTTTTGATCCAAAATCTTCTACAGCCCTCTCCAAGTGTATGATTACAGGAGCAGCAGGGTCAACAGTGTACTACAATCTAAGGCTTAGACACCCAACACTAGACATGCCACTAATAGATTATGATCTTGCTTTGCTCTTCCAACCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTCACCATTTTGCTTATCATTCTATTCATTGGTACATCCACTAAAGCTTTAGTCAAAGGCATAGATACATGGAAAAAGGAAACAATTATGAAGAAGGAAGCAGCCCAAATGTTGGAATCAGGTTCTATTCCTGATTATGCTTCTGAAGAAGACTACAAGTCACTACCAGCTGATCTACAAGATGAAGAGGTGCCTTTACTAGACAACATTTACTGGAAAGAATTATCAGTTCTTCTGTATGTTTGGGTGGCTTTTCTCATTGTTCAAATTATTAAGACATACAGCAAAACTTGTTCCATAGAGTATTGGATTCTTAATTCCTTGCAGGTGCCTATTGCAATTTCTGTTACACTTTTTGAAGCCATAAGCTTATGCAAAGGGACTAGAGTAATTGCATCAAGGGGAAAGGAAATTAATTGGAAGTTTCATAAGATTTGTCTTTACTGTTTCTGTGGAATAATAGCTGGTATGGTTAGTGGTTTGCTTGGTCTAGGAGGTGGCTTCATTTTGGGACCACTATTTTTGGAATTAGGAATTCCTCCTCAGGTAGCTAGTGCTACATCAACATTTGCTATGGTTTTCTCTTCTTCTATGTCAGTGGTACAATATTACCTTCTAGACCGCTTCCCGGTACCCTATGCTTCATACTTGGTTTTGGTTGCAACCATAGCTGCATTAACTGGCCAACATGTGGTGAGAAAGATAATTGCTATCTTTGGTAGAGCATCTATCATTGTCTTCATATTAGCCTTCACTATTTTTGTGAGCGCAATCAGTCTAGGTGGGGTGGGAATAGTGAACATGGTTGAAAAGATGGAAAATGAAGATTATATGGGGTTTGACAATATCTGCCACCATGGGAAAAAATATGGGGTTTGA 1410 0.3851 MALLAKKKTASRAATTLIWLISWSFIMIYHVSLAESVLEDEKSENIVMKERQFFWYSGKSSYERVWPEMKFGWRIVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKEAAQMLESGSIPDYASEEDYKSLPADLQDEEVPLLDNIYWKELSVLLYVWVAFLIVQIIKTYSKTCSIEYWILNSLQVPIAISVTLFEAISLCKGTRVIASRGKEINWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLDRFPVPYASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIVNMVEKMENEDYMGFDNICHHGKKYGV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04040 469 PANTHER CEREBLON 36 461 - -
Trre15g04040 469 Pfam Sulfite exporter TauE/SafE 70 188 IPR002781 GO:0016020
Trre15g04040 469 Pfam Sulfite exporter TauE/SafE 326 432 IPR002781 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04040 Trre-Chr15 50897281 50901442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04040 - - gmx:100816633 695.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04040 15 50897281 50901442 Trre15g04040 15 50897281 50901442 ECH
Trre9g01017 9 8021528 8025552 Trre15g04040 15 50897281 50901442 PCT