Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04033 ATGGATGAGATCTGGGAGAAGGCTGTGGAAACGGCGTTAGAAGGCGAGAAGGATCACGCTTCCGCTAAAACGCTAACACTTGACGGTGCCGTTAAGTGCGTTCAAGGACGTTTACCTCCTCCGAGCCTTCTAGAAAGGTTCCAGAACCTTCAGCATCTTTCGATTGCAAACGTCGGGGTTTCTTCTCTGGAGCAGTTCCCGAGGCTCCGGAGTTTGCAGAAGTTGAATCTCTCCGATAACCGGATCGCCGGTGGTTTGGAATTTTTGGTTCAGGCTGGACTCGATTCGCTTCGTGATCTCGATTTATCGAACAATAGGATTCAGTTTATCGAAGATCTTGCTCCGTTGGCGCAGGTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTCCTGTTACTCGTGTTAAGGATTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGTTGAAGTATTTGGATAAGATGGATGCGGATGAGAATGAGAGGCCGGAGTCTGATGATGAGGAAGAGGACGATGAGGAAGAGGAGGAGGAAGAAGAGGATGATCCTGGTAGTGGTGAGATTGATGGAGGAGAGGAAGATCGACATTTTGGGATGAATAATGGACATGGTGAAGGTCTTGATGTTGATGGAGTTGTTGATGCTGATGAGGATGAGGAGAGTGACGCCGATGAGGAAGTGACCGAGACTTCGAGGGGCGGAGTGAATGGGGTGAACCTGAACCATCAGGAGAATGGGTTTCATGTTGTTCCTGTTGATGTTGAAGAGGAAGATGATGATGAGGATTCTGGGGAAGAGATTGATGAGGAGGAGGGTGATGATGATGATGTGGTTGAGGTCCATGAGATTGATGATAGTGATGATGATGAGGACGGTGTTGAGTATGATGAGGATGATGATGATGATGAGGACGATGATGAGGTGGATAATGATGAAGGGGATTTTGCTGAACCTGAGAGTACTTCTGGACGGTTGGTGAGTACTGAAGGCGAGATTGATGGGCATGAGCAAGGGGAGGAAGATGGAGATGAAGATGACAATGGAGAAACTGGAGAAGATGAGATGGCGGTTGAAGAAGATGACGATGATGATGATGACGATGATGGAGAGTTTGAAGATGATGATGAAGAAGAAGACTTTGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGATGGGGTTGTTGACACTGATGAGGTTGAAAACGAGGATGGTGAAGAGGAGGAAGAAGTTGATGACGATGATGAAGACAATGATGTTCAAGAAGCGTTGCCTCCTGCCTCTTCACACCCCAAGAGAAAGAGGGACAATGATGATGAGGAAGGCGACGAGGACGATGAAGATGAAGAAGGATTCACAAAGCCATCCAAGAAGCACCACTAA 1395 0.4724 MDEIWEKAVETALEGEKDHASAKTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDADENERPESDDEEEDDEEEEEEEEDDPGSGEIDGGEEDRHFGMNNGHGEGLDVDGVVDADEDEESDADEEVTETSRGGVNGVNLNHQENGFHVVPVDVEEEDDDEDSGEEIDEEEGDDDDVVEVHEIDDSDDDEDGVEYDEDDDDDEDDDEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEMAVEEDDDDDDDDDGEFEDDDEEEDFGAGYLVQPVGQAEALNDGVVDTDEVENEDGEEEEEVDDDDEDNDVQEALPPASSHPKRKRDNDDEEGDEDDEDEEGFTKPSKKHH 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04033 464 MobiDBLite consensus disorder prediction 210 225 - -
Trre15g04033 464 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 5 167 - -
Trre15g04033 464 MobiDBLite consensus disorder prediction 159 187 - -
Trre15g04033 464 MobiDBLite consensus disorder prediction 252 315 - -
Trre15g04033 464 ProSiteProfiles Leucine-rich repeat profile. 96 117 IPR001611 GO:0005515
Trre15g04033 464 MobiDBLite consensus disorder prediction 398 425 - -
Trre15g04033 464 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 9 446 IPR045081 -
Trre15g04033 464 MobiDBLite consensus disorder prediction 333 380 - -
Trre15g04033 464 SUPERFAMILY L domain-like 40 157 - -
Trre15g04033 464 Gene3D Ribonuclease Inhibitor 5 170 IPR032675 -
Trre15g04033 464 Pfam Leucine-rich repeat 56 165 - -
Trre15g04033 464 MobiDBLite consensus disorder prediction 155 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04033 Trre-Chr15 50854678 50857625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04033 - - mtr:11406731 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04033 15 50854678 50857625 Trre15g04033 15 50854678 50857625 ECH