Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04011 ATGGCGTTTAAGAAAACCCTAACTCAACGCCTCTTAAGCATAACCAAAATCTCATCACAATCTCTTTCTAACTGTCGCATTTCATCTTCTTCTCTTCAATCACGAACTCCTTCCACCGCCGCTCACCGTGACATTGCTCCGGAGCCCGGAGATTCAACCACTGACGGCGTTTTCCGTCGATTCCTCCACAAAAGAGCTGTATTCCAACCGGAGATCGGACAGAGGAACCCTTCCTCCGCCGATGGACTTCTCCAGAAACTCCGGGAGATGGACATTGCGAGAAGCCGGATCCGATTGGACGGTTTGACTCCGCCGGAAACGGAGGAATCGACTGTTGAAGTTAAAGATGTTCGGAAATTGTTAAGAGCGGCTCAGCTTGAATCTGTGAAATCAAAGCTGAGGAAGATTCCGCAGAGTTGTGTTAATTATTCGGAGTTTATTCAAATGTGTGGTGAAAATTGTTCCGATCAAGAACAAGCGACAAAGATTGCGAAGATACTCGATGATTCAGCGACAGTGATTATCTTAGGCGACGTCGTTTTTCTCAAACCTGAACAGGTAGCTAAAACAATCCAGGCTCTACTCCCTGTACCAGGACCAAAGTCAAACGAGGCAGAAAGAAAAGAACTTGAGGAAATGGAGAAAGAGAAAGTAGCCATTGACAACAGAGCTGACAAGATGGTTCGCCGGGAACTCTGGGGAGGACTCGGTTTTCTGATGGTGCAAACTTTAGCATTCATGAGGCTCACATTCTGGGAACTTAACTGGGATGTAATGGAGCCTATATGCTTCTATGTGACCTCTATGTACTTCATGGCCGGCTACACATTCTTCCTCAGAACATCCAAAGAACCTTGCTTTGAAGGTTTCTACCAAAGCCGTTTCAGCACTAAGCAGAAGCGTTTGATGAAACTTCAAAATTTTGATATTGCAAGGTATAATCAACTTAGGGATGCTTCACCACTAGCATCATCTTCTGAGTTGAATTCAAATATTGTTCATCCATTGAACCAGTTTCAAAGAAATATTTGA 1032 0.4448 MAFKKTLTQRLLSITKISSQSLSNCRISSSSLQSRTPSTAAHRDIAPEPGDSTTDGVFRRFLHKRAVFQPEIGQRNPSSADGLLQKLREMDIARSRIRLDGLTPPETEESTVEVKDVRKLLRAAQLESVKSKLRKIPQSCVNYSEFIQMCGENCSDQEQATKIAKILDDSATVIILGDVVFLKPEQVAKTIQALLPVPGPKSNEAERKELEEMEKEKVAIDNRADKMVRRELWGGLGFLMVQTLAFMRLTFWELNWDVMEPICFYVTSMYFMAGYTFFLRTSKEPCFEGFYQSRFSTKQKRLMKLQNFDIARYNQLRDASPLASSSELNSNIVHPLNQFQRNI 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04011 343 Coils Coil 203 230 - -
Trre15g04011 343 MobiDBLite consensus disorder prediction 26 40 - -
Trre15g04011 343 Pfam Mitochondrial calcium uniporter 158 316 IPR006769 -
Trre15g04011 343 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 37 329 IPR039055 GO:0051560
Trre15g04011 343 MobiDBLite consensus disorder prediction 26 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04011 Trre-Chr15 50499588 50503141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04011 K20858 - gmx:100785566 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04011 15 50499588 50503141 Trre15g04011 15 50499588 50503141 ECH