Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03990 ATGGGAGATATTAGGCTTAATAGGGTAGATCAAGGACAAACCAAGATTAAGAATGTTCCAATAGCTGTTACTCCTGAAGGGTTTTGGTGTTGTCCTTCACCTGTTGTGTTTCAGAAAAGTCATAAGCCTCAAAATCCGTTGAATAAAACTAAACCGTCTTCGTCACCACCACAACCACAACCGAAAAATAGTGTTCAGAAAAAGCCGGTTGCAGTGCAAGTGACTGAGAGAAGAGGTTCTGCATCTGTTTCTGCACCTGCATCGTCTAGATTGGTTGTTTCTGATGATCACCAATGTAGTATTGGTTCGGAAAGGGCTTCAGCTGGAACATCTTTGGCTGGTGAGAGAGTATCTAGACCTAAAATTGAAACCATGCCGAGAAAGGTAGCTATTGAGTTTGGTGAACCTGGAACTTGTGATATGAAGGTGGTTTTATTAGGGAAACAGGGTTTTTCTGTTAAGTTGAGTGTGCATCGCGATGTTCTGATAGAGAAGAGTAGTTTCTTTTCTGAAAAGATTTCGGAACAATCAGATTTGTCATGTCTACAAATCGGCGATTGTGAGGATGTTGAGATATATGTTGAAGCTGTTGGTTTGATGTATTGTAAGGAGATGAAACAGCGGCTCATGAAACAGAATGTTTCTCGCATTCTTCGGATTCTTAAGGTTGCGGAATTCCTCGGCTTCAGCTCATGTATCCAATCATGCTTAGAGTACTTGGAGGCTGTCCCATGGATTGGAGATGAAGAAGAAGAGAAAGTGGTCTCGACTGTACTACAACTCCAAGGGGAAGGAATCGGGGTCAACCCTGTATTGAAACGAGTTTCTTCCGAGGTTTCCAATGTCGCGAAAGACACACTTTCCCACATCATAGAACTTGTTCTCAAAAGTAATGAGGAAAAAGGCCGCCGAGAGATGAAATCCATAGTTCTAAAGCTTCTCAGAGAGAACAACAGTCTTCCGAGTTACGCCCGTTCCACTGACACCTGTAATGACATGATGTATAGATCATGTAGAAGCTGCTTAGATTCATTACTATCTCTCTTCAAGCAGGCCGCAGAACCAACCTTTGCAGAGAAACCAAGCAATGAAAGAGATCTCGTAGTAAAGCATATCGCTCTAGAAGCTGATAACCTTTCATGGTTGCTTGATATTTTGGTTGACAAACAAGGAGCTGATGAGTTTGCGCTCTTATGGGCAAACCAAGAGGAATTAGCTGTCTTACATGCAAAGCTTCCGATTGTGTCTCGTTATCACGTTAGCTGCATTTCCGGAAGACTATTTGTCTGCATCGGTAGAGGGGAGTTGTTACCATCAAAGGAAACACGACAATTGTTGCTACAGACGTGGCTGCAGCCGCTAATGAACGACTACAATTGGTTACAGCATGGATGCAGGTCGTTTGATAGGAAACTTGTGGAGGAAGGTATCGGAAGAACGATTCTCACCTTGCCTTTAGAAGATCAACAAAGTATTTTGCTTTCTTGGGTTGGAAGTTTCTTGAAAACCGGCGATAGCTGTCCTAATCTTCAAAGAGCTTTCGAGGTGTGGTGGCGTAGAACTTTCATCAGGCCGTATGTTGAAAATCAAGGTAATGCCATGTCAGATAGTTCGACGCTATCAAAGAAAGACGATTAA 1638 0.4274 MGDIRLNRVDQGQTKIKNVPIAVTPEGFWCCPSPVVFQKSHKPQNPLNKTKPSSSPPQPQPKNSVQKKPVAVQVTERRGSASVSAPASSRLVVSDDHQCSIGSERASAGTSLAGERVSRPKIETMPRKVAIEFGEPGTCDMKVVLLGKQGFSVKLSVHRDVLIEKSSFFSEKISEQSDLSCLQIGDCEDVEIYVEAVGLMYCKEMKQRLMKQNVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWIGDEEEEKVVSTVLQLQGEGIGVNPVLKRVSSEVSNVAKDTLSHIIELVLKSNEEKGRREMKSIVLKLLRENNSLPSYARSTDTCNDMMYRSCRSCLDSLLSLFKQAAEPTFAEKPSNERDLVVKHIALEADNLSWLLDILVDKQGADEFALLWANQEELAVLHAKLPIVSRYHVSCISGRLFVCIGRGELLPSKETRQLLLQTWLQPLMNDYNWLQHGCRSFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDSCPNLQRAFEVWWRRTFIRPYVENQGNAMSDSSTLSKKDD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03990 545 Gene3D Potassium Channel Kv1.1; Chain A 133 259 IPR011333 -
Trre15g03990 545 MobiDBLite consensus disorder prediction 40 69 - -
Trre15g03990 545 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 129 531 IPR038920 -
Trre15g03990 545 SUPERFAMILY POZ domain 138 241 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03990 Trre-Chr15 50191991 50195234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03990 - - gmx:100789609 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03990 15 50191991 50195234 Trre15g03990 15 50191991 50195234 ECH