Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03983 ATGGGGCTTGAAGGTTTGATTCCAAGGCACAACCGTTCTAAGAGCTTTCCTGATAAGAAAACAGGAAAAGAGGATAGTCCAGATAACCTTGAGACTTCAACTCAAACAAAGCTGGATGCAGGTTACCTCACTGAATGCAGTGAAGCTCGAAAACAGCAAACCCCGATGAATAATGCTCGACATAATCTGAAGCAAGAGATTTTACAATTAGAGAAAAGACTAGAAGACCAATTTAAAGTCAGATGCACGCTAGAAAAAGCACTCGGATACAGACCTATATCTCTTGTTAATCCAAATGACATGACAATACCTAAGCCAACCACAGATTTAATTAAAGAAATTGCAGTTTTGGAGTTAGAAGTTGTATATTTGGAACAGTATCTTCTTTCCTTGTACCGTAAAGCATTTGAACTACAACTATCTCCCGCCGCGGCAGCTCCATCTACCGTGGAGGAAAGCGAAAAGTCTCCTCCGCTAACAACACCTAGAGCAAGATACCTTGAAGTTTCTTCACCTGAGGTCTTAACCAAAAGAGGATTTTCTTCTGTACAATGTATTGATCATGAGCTTAATACTCCTCAAAAGGAATGTAATGGATATGAACTCGAGACTCCAGATAAAGAATACACTGTACATCATCCGGAAGAAAAGCATTTAGACTCCAGTGTGCATCGCTGTCACTCCTCGCTATCTCAATATTCAGCATTTACAGAAAAAGTATCTCCTCCAGAAGAAGAGTCGACTGATTCTCTACGCGCATGTTATTCTCAACCCTTGTCCATGTTAGAGTATGCCGAAAGTGTTGACGCTTCAACAAAAATAATCAGTCTAGCAGAACATCTCGGTACTCGAATATTTGATCATATTCCAGAAACCGCTAATAGGCTTTCCGAGGATATGATTAAATGTATATCAGCTATATATTACAAACTTGCAGACCCACCTGTAACAAATCCCGGCCTTTCATCTCCTAGTACTTCAACAAGTGCGTTTTCTATTGGAGATCAAGGCGAAATGTGGAGTCCAGGGTTCAGAAATAACTCCTCTTTTGATGTACAGTTAGACAATCCTTTTTTGGTTGAAGGATTCAAAGAGTTTAGTGGTCCCTATAGCACCATGGTTGAGGTATCGTGGATTTATAACGAGAATCAGAAATTGAGTGATACAGTGCAGTTGCTTCAGACTTACAGGTCACTTATTTGTCAATTAGAAGAAGTAGATCCGGGGAAGTTGAAACACGAGGAGAAGTTAGCTTTCTGGATCAACGTACACAATGCTTTAGTGATGCATGCTTTTTTGGCTTATGGAATTCCACAAAACAATGTGAAAAGAGTCTTTCTTCTTTTGAAGGCTGCATATAATGTTGGAGGTCATACAGTCAGTGCAGACACAATACAAAATACTATACTAGGTTGCCGAATGTCTCGTCCTGGACAGTGGTTCCGTGTGTTCTTTTCTTCGAGGACAAAATTCAAGCCTGGAGATGGACGACAAGCATATGCAATTAAACAGCCTGAGCCTCTTTTGCACTTCACACTTTGTTCCGGAAACCACTCTGATCCAGCGGTACGTGTATATACACCGAGGAGAGTGTTTCAAGAACTAGAGATTGCCAAGGAAGAGTACATTAGAGCCAGCTTTGGGGTACGCAAAGACCGAAAAATACTTCTACCTAAGATTGTAGATTCATTCTCCAAGGATGCAGGTTTGTCCCATGCCAGTCTTATAGAGATGATCCAACAGTCTCTACCTGAATCCCTGAAAAAGAGTGTTAAGAAATCTCATCTTGCGAAATCCGGGAAAAGCATTGAATGGATTCCACACAACTTCACTTTTCGATATCTCATACCTAAGGAGCTGGTAAAATAA 1869 0.4066 MGLEGLIPRHNRSKSFPDKKTGKEDSPDNLETSTQTKLDAGYLTECSEARKQQTPMNNARHNLKQEILQLEKRLEDQFKVRCTLEKALGYRPISLVNPNDMTIPKPTTDLIKEIAVLELEVVYLEQYLLSLYRKAFELQLSPAAAAPSTVEESEKSPPLTTPRARYLEVSSPEVLTKRGFSSVQCIDHELNTPQKECNGYELETPDKEYTVHHPEEKHLDSSVHRCHSSLSQYSAFTEKVSPPEEESTDSLRACYSQPLSMLEYAESVDASTKIISLAEHLGTRIFDHIPETANRLSEDMIKCISAIYYKLADPPVTNPGLSSPSTSTSAFSIGDQGEMWSPGFRNNSSFDVQLDNPFLVEGFKEFSGPYSTMVEVSWIYNENQKLSDTVQLLQTYRSLICQLEEVDPGKLKHEEKLAFWINVHNALVMHAFLAYGIPQNNVKRVFLLLKAAYNVGGHTVSADTIQNTILGCRMSRPGQWFRVFFSSRTKFKPGDGRQAYAIKQPEPLLHFTLCSGNHSDPAVRVYTPRRVFQELEIAKEEYIRASFGVRKDRKILLPKIVDSFSKDAGLSHASLIEMIQQSLPESLKKSVKKSHLAKSGKSIEWIPHNFTFRYLIPKELVK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03983 622 MobiDBLite consensus disorder prediction 1 37 - -
Trre15g03983 622 PANTHER UNCHARACTERIZED 34 620 - -
Trre15g03983 622 MobiDBLite consensus disorder prediction 11 27 - -
Trre15g03983 622 Pfam Leucine-zipper of ternary complex factor MIP1 56 137 IPR025757 -
Trre15g03983 622 Pfam Protein of unknown function, DUF547 410 543 IPR006869 -
Trre15g03983 622 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03983 Trre-Chr15 50063273 50067316 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03983 - - gmx:100816025 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03983 15 50063273 50067316 Trre15g03983 15 50063273 50067316 ECH
Trre9g00951 9 7303044 7304534 Trre15g03983 15 50063273 50067316 PCT