Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03981 ATGGGTAACTGCACCTCGTTCGATTCATCGCAGGTTGAAATTGAAACAGCAAAAGTTGTCGTACACGACGGTACTATGAAAGAATTCTCGTACCCAGTTAAAGTTTCTTATCTTTTACAAATTTATCAAGGATGTTTCATATGTGATTCTGATGAAATGGGATATGACGACGTCGTTTTACCTATGCATGAAGATCAAGTTTTAACACTTGGTCAACTTTATTTTGCTTTACCGTTGACTCAGTTAAAAAAGTCTTTAACGGTGGTGGAATTGGCTTCGTTGGCCGTGAAAGCTAATTCTGCTCTTAATAAGAGTTCTGCTGGTAAGAAAAATGGGTTTAGACGGAAACATATTGCCATGTTTTCTTCTGAAGGGAGAGTTGTGCCGGAAAGTGATGGTGGTGATGTTGCTGTTAGTGTTGTTAGATCGAAGAGTAATGGAAGACGGAGAATTAGTGGTGCCGGTGGTGGTGGTGGTAGAGGGAAGTTTATGGCGGGGTTGAGTTCTATTCCGGAGTAG 519 0.4104 MGNCTSFDSSQVEIETAKVVVHDGTMKEFSYPVKVSYLLQIYQGCFICDSDEMGYDDVVLPMHEDQVLTLGQLYFALPLTQLKKSLTVVELASLAVKANSALNKSSAGKKNGFRRKHIAMFSSEGRVVPESDGGDVAVSVVRSKSNGRRRISGAGGGGGRGKFMAGLSSIPE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03981 172 Pfam PADRE domain 1 172 IPR025322 -
Trre15g03981 172 MobiDBLite consensus disorder prediction 148 172 - -
Trre15g03981 172 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 15 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03981 Trre-Chr15 50020705 50021223 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03981 - - ccaj:109816183 162.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03981 15 50020705 50021223 Trre15g03981 15 50020705 50021223 ECH
Trre9g00948 9 7268157 7268636 Trre15g03981 15 50020705 50021223 PCT