Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03980 ATGGAGGAGTTGCCAGGGGTGTTAGGAACCAGCTCAAGTTTTGCTCTTAGATTGGGGCAAGCTGTCTTTTCCTCTGCTTCTCTTTTCTTCATGTGTTTGGATGTTGATTTCTATGGTTACTCTGCTTTCTGCTTTTTGGTAATGGTGATGGGTTTGGTGATTTCCTGGAGCACAACCTTACTGATTGTAGATGGATACTCTATCTTTGTCAAAAATGTACCAAAACAACGAAGATTCATTTTCACCATTACTTTTGGCGACATGGTTTTGTCATATCTCTTACTAGCTGCAGCAAGTTCAACTGCTGGTGTCACAGATTTGTTGCGGAAAGCTGATAAATCATATTGTCCACAAAATTTATGCAGCAGATACCTAATCTCTGCTGCCATGGCCATCTTGGCTTGGTTTCTTTCATCAGCTTCTTGTCTAATTAACTTTTGGCTTTTCTCCTCTCTGTGA 459 0.4074 MEELPGVLGTSSSFALRLGQAVFSSASLFFMCLDVDFYGYSAFCFLVMVMGLVISWSTTLLIVDGYSIFVKNVPKQRRFIFTITFGDMVLSYLLLAAASSTAGVTDLLRKADKSYCPQNLCSRYLISAAMAILAWFLSSASCLINFWLFSSL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03980 152 Pfam Casparian strip membrane protein domain 9 137 IPR006702 -
Trre15g03980 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03980 Trre-Chr15 49973874 49975518 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03980 - - gmx:100306215 216.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03980 15 49973874 49975518 Trre15g03980 15 49973874 49975518 ECH