Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03954 ATGATTACCGAAAGTTTAGTAGATAGAAAACACTATGTTCTTGTACATGGTGCATGCCATGGAGCTTGGTGTTGGTACAAGGTCAAACCACTCTTAGAATCTGCTGGTCACCTTGTTACACTAGTTGATCTTGCAGCTTCTGGAACTAACTTGAAGAAAATTGATGATGTTAATACAATTTTAGAATACTCTGAACCTTTGTTGCAGCTAATGGCAACAATTCCACCAAATGAAAAGGTGATTCTTGTTGGTCATAGCCTTGGAGGACTTAACATAGCTCTTGCAATGGAACAATTTCCAGAAAAAATAGCTATTGGTGTTTTCTTAACAGCTTTTACTCCTGACATTGAACACAATGCATCTTATATAATGGAAAAGTATATTGAGAGTATTCCGGCGGCTGAATGGTTGGACACTGAATTTTCACAGAGTGGAAACAAAACATCAATGTTCTTTGGTTCAAAATTCTTGTCCAATAAACTCTATCAACAATCCTCCAATAAGGATCTTGAGTTGTCCAAGACTTTATTGAGGCATGGGTCCCTTTTTATGGAAGACTTGACTCAGCAAAATAACTTATTCACTAAACAGGGTTATGGATCAGTTTCACGTGCTTTTATTGTTTGCAATGATGACCTTGCAATTCCTTTGAAATTTCAACATTGGATGATCCAAAATGCTGGGATTAATAATGTATTTGAGATCAAAGACGCAGATCATATGGCTATGTTTTGCAAGCCACAAGAACTATATGATTCTCTCAATCAGATATCTATTAAATACACATGA 789 0.3612 MITESLVDRKHYVLVHGACHGAWCWYKVKPLLESAGHLVTLVDLAASGTNLKKIDDVNTILEYSEPLLQLMATIPPNEKVILVGHSLGGLNIALAMEQFPEKIAIGVFLTAFTPDIEHNASYIMEKYIESIPAAEWLDTEFSQSGNKTSMFFGSKFLSNKLYQQSSNKDLELSKTLLRHGSLFMEDLTQQNNLFTKQGYGSVSRAFIVCNDDLAIPLKFQHWMIQNAGINNVFEIKDADHMAMFCKPQELYDSLNQISIKYT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03954 262 Gene3D alpha/beta hydrolase 7 262 IPR029058 -
Trre15g03954 262 PANTHER METHYLESTERASE FAMILY MEMBER 9 257 IPR045889 -
Trre15g03954 262 FunFam (S)-hydroxynitrile lyase 7 262 - -
Trre15g03954 262 Pfam Alpha/beta hydrolase family 13 250 IPR000073 -
Trre15g03954 262 SUPERFAMILY alpha/beta-Hydrolases 13 256 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03954 Trre-Chr15 49627588 49629743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03954 7 163 Miscellaneous Gene Families AT5G10300 51.852 5.78e-50 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03954 - - gmx:100796281 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03954 15 49627588 49629743 Trre15g03954 15 49627588 49629743 ECH