Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03485 ATGGAAATACTTAGAAGCATGAAGTTCCTCATATACATAGTTTTTTCTCTTCTCTTTCTTTATCAATACTCAAATGGCTCCAATCTTATCCTTCAATCTTGTAAGGATGCCTCTAATAATGACCCAAATTTAAGCTATGATTTTTGTGTTACATCACTCAATGAAGCTTACAAGAATAAATCACAACCTACCAAACTTGAAGATCTTGTGAACATGTCAATTCAGCTAACCAAGTCCAATGGAACCAAGATCATTTCCATAATTTCAAAGCAATTGCAAAACCAAACTCAAGGTGAATATGTGAAATCTTGTTTACAAGATTGTCTTGATCTTTACAATGAATCACTTTCATCATTAGATGATGCTATGGTTGCTTTCAATCAATCAAAGGATTTGGACACGGCCGGTATAAGCGTTAGCGCCGCGTTGGATGATTCGGTTACATGTGAAGATCAATTCAAAGAAAAGAAAGAGGGAAATGAAATTTCTCCTTTAACAAAAGAGAATCATGTTTACTTTCAACTCAACGTGATATCTCTATGTTTCATTCAAATGATTCGTCAACATAACTAG 573 0.3403 MEILRSMKFLIYIVFSLLFLYQYSNGSNLILQSCKDASNNDPNLSYDFCVTSLNEAYKNKSQPTKLEDLVNMSIQLTKSNGTKIISIISKQLQNQTQGEYVKSCLQDCLDLYNESLSSLDDAMVAFNQSKDLDTAGISVSAALDDSVTCEDQFKEKKEGNEISPLTKENHVYFQLNVISLCFIQMIRQHN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03485 190 Pfam Plant invertase/pectin methylesterase inhibitor 29 180 IPR006501 GO:0004857
Trre15g03485 190 NCBIfam pectinesterase inhibitor domain 7 186 IPR006501 GO:0004857
Trre15g03485 190 FunFam Putative invertase inhibitor 25 186 - -
Trre15g03485 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 186 IPR035513 -
Trre15g03485 190 SMART PMEI_2 25 182 IPR006501 GO:0004857
Trre15g03485 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 186 IPR035513 -
Trre15g03485 190 CDD PMEI-Pla_a_1_like 34 185 IPR034088 -
Trre15g03485 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 182 - -
Trre15g03485 190 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03485 Trre-Chr15 41660709 41661281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03485 - - gmx:100817110 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03485 15 41660709 41661281 Trre15g03485 15 41660709 41661281 ECH