Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03467 ATGGATCAGTTGTCGGCGATCAGCGAGGATCTTGCGGAGATCGACGGACGCGTCGCCGACAATTTCCGCGCTCTATCAAATGGATTTCAGAAGCTGGAGAAGATTAAGGATTCGAGTAGACAAAGCCGTCAATTGGAAGAGCTCACGGAGAAAATGCGAGAGGCTAAAGGGCTTATTAAAGAGTTCGATAAAGAAGTCAAAGCCTTGGAGGCTCGTTTTGACAATAAAACTACCAAATTTTTGAATGAGAAAAAGCAGTCAATGATCAAAGAGTTGAATTCATATGTTGCTTTGAAGAAACAATATGCTTCAAATATTGAGAATAAGCGAATTGAACTCTTTGAGGGACCCAGTGAAGGTTACACAGAAGAAAATGTCTTGCTAGCTTCCGCAATGACAAATGAACAGCTAATGGATCAAGGGAATCGGATGATGGATGACACAGATCAAGCCATTGAAAGGGGGAAAAGGATTGTTCAAGACACAATAAATGTTGGTACTGAGACTGCAGCAGCTCTTAAGGCTCAGACGGAACAAATGAGCAGAGTTGTCAATGAGCTGGATTCTATCCATTTCTCTATAAAGAAAGCATCTAAACTGGTCAAGGAAATCGGTAGGCAGGTTGCTACTGACAAGTGTATTATGGCATTACTTTTCCTTATTGTCATTGGAGTAATTGCTATCGTTATTGTGAAGCTTGTGCATCCAGAAAACAAGGACATTCGCGACATTCCAGGATTAGCTCCTCCGGTCATGAACAATAGAAGATTGCTTTGGAATCACAGTTGA 789 0.4157 MDQLSAISEDLAEIDGRVADNFRALSNGFQKLEKIKDSSRQSRQLEELTEKMREAKGLIKEFDKEVKALEARFDNKTTKFLNEKKQSMIKELNSYVALKKQYASNIENKRIELFEGPSEGYTEENVLLASAMTNEQLMDQGNRMMDDTDQAIERGKRIVQDTINVGTETAAALKAQTEQMSRVVNELDSIHFSIKKASKLVKEIGRQVATDKCIMALLFLIVIGVIAIVIVKLVHPENKDIRDIPGLAPPVMNNRRLLWNHS 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03467 262 SUPERFAMILY SNARE fusion complex 132 205 - -
Trre15g03467 262 SMART tSNARE_6 137 204 IPR000727 -
Trre15g03467 262 CDD SNARE_SNAP25N_23N_29N_SEC9N 139 203 IPR044766 GO:0005484|GO:0031201
Trre15g03467 262 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 24 231 - -
Trre15g03467 262 Gene3D - 133 212 - -
Trre15g03467 262 FunFam novel plant SNARE 11 133 212 - -
Trre15g03467 262 Coils Coil 35 79 - -
Trre15g03467 262 Pfam Sec20 150 231 IPR005606 GO:0005484|GO:0006890
Trre15g03467 262 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 142 204 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03467 Trre-Chr15 41290426 41294308 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03467 K08494 - gmx:100786429 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03467 15 41290426 41294308 Trre15g03467 15 41290426 41294308 ECH