Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03294 ATGGCCGACCACTCCGACGACCTCGACCAACTCCTCGACAGCGCTTTAGATGATTTCCAGACCCTCAACCTAAATTCTTCCCTTCCAAGAAGCGGGGAACAAACTTCCAAGAAAAATGAGTCTCCTTCTCTACCCTCAGGGGTTCAAGGATTGGGGTTAGGTTTACCTGATTTGAGAACAAAGAAAAAAGGTAAACAAAAGGTTTCCAAAGATGCTCATGTATCTGAGGCTCTCAACAAACTCAGGGAGCAAACTAAAGAAGCAGTTAAGGGCCTTGAATTCATCACCCCGCCTGGTGCTGCTGATGATTTGGGTAAAGATGGCATGATGGAAGATTGGGTTAAACAGTTTGAAGAACTTGCTGGCTCTCAGGACATGGAATCTATTGTAGAGACCATGATGCAACAACTTCTGTCCAAGGAAATACTTGCTGAACCAATGAAGGAAATTGGAGAAAGGTATCCCAAGTGGTTGGAAGAGCATAAAGCCAGCTTAAGCAAAGAAGAATATGAACGGTATTCAAACCAATACGGTCTGATACGGAATCTTAATGAAGTTTATGAAAAAGATTCTGGAAACTTCACCAAGATTGTTGAGCTCATGCAGAAAATGCAAGACTGTGGACAACCTCCAAATGATATTGTCCAGGAGCTTGCTCCCGATTTCGATTTAGCTAGCCTTGGCCAGTTATCTCCAGAAATGGTTGATGCATCTCAGCCAAATTGTGCAATAATGTGA 738 0.4322 MADHSDDLDQLLDSALDDFQTLNLNSSLPRSGEQTSKKNESPSLPSGVQGLGLGLPDLRTKKKGKQKVSKDAHVSEALNKLREQTKEAVKGLEFITPPGAADDLGKDGMMEDWVKQFEELAGSQDMESIVETMMQQLLSKEILAEPMKEIGERYPKWLEEHKASLSKEEYERYSNQYGLIRNLNEVYEKDSGNFTKIVELMQKMQDCGQPPNDIVQELAPDFDLASLGQLSPEMVDASQPNCAIM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03294 245 MobiDBLite consensus disorder prediction 23 46 - -
Trre15g03294 245 Pfam Pex19 protein family 46 245 IPR006708 GO:0005777
Trre15g03294 245 Gene3D Pex19, mPTS binding domain 114 241 IPR038322 -
Trre15g03294 245 MobiDBLite consensus disorder prediction 58 72 - -
Trre15g03294 245 PANTHER PEROXISOMAL BIOGENESIS FACTOR 19 3 245 IPR006708 GO:0005777
Trre15g03294 245 MobiDBLite consensus disorder prediction 23 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03294 Trre-Chr15 32283170 32285692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03294 K13337 - gmx:100527390 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03294 15 32283170 32285692 Trre15g03294 15 32283170 32285692 ECH