Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03245 ATGTTATCATCAAAATCAAAAGCTTTGTTTTTCATTTTTAAGATATTGATGTTGAATGTGATAACACATGCATGTGGTCCATGCATTCAACCAAATCCACCACCTTATCACAAGAAACCAAGTCATCCAAAATATCCACCACATCACGGCGGTGGCGGAGGAGGAGGGAGAGGAAAACAGCCAAAAGTATCCCCTCCTCCAGTGGTTGTGGTGCCGCCGATTATCGTTACACCACCACTTCAACCACCACCGACGATCATATATCCACCACCAACAACCCCTCCTGTTTTTCCTCCACCAATTACTCAACCAACATGTCCAATTGATGCACTTAAGCTAGGGCTTTGTTTGGATGTGCTTGGAGGAATTGTTCATGTTGTAATTGGTAACCCTATTGAGAATGAGTGTTGTCCTGTTATTCAAGGGTTGGTTGATCTTGAAGCTGCAATTTGTCTTTGTACTGCTATTAGGGCTAAGGTTCTTAATCTTAATATTTATCTTCCGCTTGCTCTTCAAGTATTGGCCACTTGTGGGAAGACTCCTCCTCGTGGTTTTGTTTGTCCACCTCTCTAA 573 0.4276 MLSSKSKALFFIFKILMLNVITHACGPCIQPNPPPYHKKPSHPKYPPHHGGGGGGGRGKQPKVSPPPVVVVPPIIVTPPLQPPPTIIYPPPTTPPVFPPPITQPTCPIDALKLGLCLDVLGGIVHVVIGNPIENECCPVIQGLVDLEAAICLCTAIRAKVLNLNIYLPLALQVLATCGKTPPRGFVCPPL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03245 190 MobiDBLite consensus disorder prediction 36 64 - -
Trre15g03245 190 Pfam Hydrophobic seed protein 105 188 IPR027923 -
Trre15g03245 190 PANTHER - 4 187 - -
Trre15g03245 190 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 108 189 IPR036312 -
Trre15g03245 190 Gene3D - 101 189 IPR036312 -
Trre15g03245 190 SMART aai_6 106 187 IPR016140 -
Trre15g03245 190 CDD HPS_like 104 187 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03245 Trre-Chr15 31333819 31334391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03245 105 189 Acyl Lipid Metabolism Gene Families AT4G22490 34.118 6.12e-10 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03245 - - tpra:123885321 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03245 15 31333819 31334391 Trre15g03245 15 31333819 31334391 ECH