Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03241 ATGGCTTCCAAAACTTGTTCCTCTCTTGCTATTTTCCTCACAATCAACCTTCTCTTTTTTTCATTTGTTTCAGCTTGTGGTTCTGACAAATGCAAGCCTACACCAAAGCCAAAACCCAGCCCAACTCCTAATTCAAGTGGCTCATGCCCACGTGATACACTCAAATTTGGTGTATGTGGCAATGTTCTAAGTGGGTTGTTGAATATAACAATTGGTCAACCACCAATGGCCCCTTGTTGTTCACTCCTAAATGGCCTTGTTGACCTTGAGGCTGCATCGTGTCTATGCACTGCGCTTAAAGCTAACATTTTGGGCGTTATACATGTTGACCTTCCAATTTCACTTAGCTTGCTACTCAGTGTTTGCTCAAGGAAAGTCCCACATGATTTCAAATGTGCCTATTAA 405 0.4222 MASKTCSSLAIFLTINLLFFSFVSACGSDKCKPTPKPKPSPTPNSSGSCPRDTLKFGVCGNVLSGLLNITIGQPPMAPCCSLLNGLVDLEAASCLCTALKANILGVIHVDLPISLSLLLSVCSRKVPHDFKCAY 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03241 134 PANTHER - 7 132 - -
Trre15g03241 134 Pfam Hydrophobic seed protein 49 133 IPR027923 -
Trre15g03241 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 132 IPR036312 -
Trre15g03241 134 CDD HPS_like 47 132 IPR027923 -
Trre15g03241 134 FunFam pEARLI1-like lipid transfer protein 1 47 133 - -
Trre15g03241 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Trre15g03241 134 Gene3D - 48 133 IPR036312 -
Trre15g03241 134 SMART aai_6 49 132 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03241 Trre-Chr15 31302356 31302760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03241 40 132 Acyl Lipid Metabolism Gene Families AT4G22490 42.553 1.20e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03241 - - gmx:100801985 189.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03241 15 31302356 31302760 Trre15g03241 15 31302356 31302760 ECH