Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03200 ATGGCATTGACCTTGCAAACTCCGCTTTGTGCAACTGTTTCCTCTTCCTCTGCTTCATCATCATCATCATCAACAACAAGATCCTTCTCCTTCCTCCGTTCAACACCGCCACCGACTCTCCTCTTCAACTTCAACAACAACAACTCCTTCCCTCGAATTCGCGCTTCCTCCACCGACACTGTTATCACTGAATTAGACGCTGTTTCTTCCTTCAGCGAAATCGTTCCAGATACCGTTATTTTCGATGATTTCCAAAAATTTCCTCCAACTGCTGCTACTGTTAGTTCATCTCTTATTTTGGGGATATGTGGTCTTCCAGATACTATTTTTAGGAATGCTGTTGAAATGGCTTTGGCTGATTCTGAATGTTATGGACTTGAAGATCCTAATGCAAGATTATCTTGTTTCGCCACCAAGGCTTTAGTGAATGTTGGTAGTGACATGACAAAGCTTGTCCCTGGCCGTGTTTCAACAGAAGTGGATGCACGTCTTGCTTATGACACACATGGCATTATCAGGAAGGTGCATGACCTGTTGAAGTTGTACAATGATAGTAATGTTCCTCATGACCGTCTGCTATTTAAAATTCCTTCAACTTGGCAAGGAATAGAGGCTGCAAGATTGCTGGAATCCGAGGGAATACAGACACATTTGACTTTCGTTTACAGCTTTGCCCAAGCTGCTGCTGCTGCTCAAGCTGGTGCTTCTGTTATTCAAATTTTTGTTGGTCGCGTCAGGGACTGGGCACGTAACCATTCTGATGACAAAGAGATAGAAGCTGCCATACAAAGTGGAGAGGATCCTGGGTTGGCATTGGCCACAAAAGCTTACAATTATATTCACAAATATGGACATAAGTCTAAGTTGATGGCAGCAGCAGTTCGCAACAAGCAGGACCTATTTAGTCTTCTGGGGGTTGACTACATCATAGCTCCATTGAAGGTGTTGCAGTCTCTCAAAGAATCCGTTGCTTCTCCTGATGAGAAATACTCTTTCGTTAGGAGGCTATCACCGCAGTCTGCAGGCCGCTACGTGTTTAGTGATGAAGAGCTTATTAAATGGGACCAAATGAGCCTTGCAAATGCCATGGGGCCAGCAGCGGTGCAGCTGCTAACTTCTGGGCTAGATGGTTATGCTGATCAAGCAAAGCGGGTGGAAGATTTATTCGGGAAAATTTGGCCACCACCAAATGTATAA 1197 0.4453 MALTLQTPLCATVSSSSASSSSSSTTRSFSFLRSTPPPTLLFNFNNNNSFPRIRASSTDTVITELDAVSSFSEIVPDTVIFDDFQKFPPTAATVSSSLILGICGLPDTIFRNAVEMALADSECYGLEDPNARLSCFATKALVNVGSDMTKLVPGRVSTEVDARLAYDTHGIIRKVHDLLKLYNDSNVPHDRLLFKIPSTWQGIEAARLLESEGIQTHLTFVYSFAQAAAAAQAGASVIQIFVGRVRDWARNHSDDKEIEAAIQSGEDPGLALATKAYNYIHKYGHKSKLMAAAVRNKQDLFSLLGVDYIIAPLKVLQSLKESVASPDEKYSFVRRLSPQSAGRYVFSDEELIKWDQMSLANAMGPAAVQLLTSGLDGYADQAKRVEDLFGKIWPPPNV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03200 398 Gene3D Aldolase class I 62 391 IPR013785 -
Trre15g03200 398 PANTHER TRANSALDOLASE 62 393 IPR001585 GO:0005975
Trre15g03200 398 SUPERFAMILY Aldolase 63 393 - -
Trre15g03200 398 FunFam Transaldolase B 62 392 - -
Trre15g03200 398 Pfam Transaldolase/Fructose-6-phosphate aldolase 77 332 IPR001585 GO:0005975
Trre15g03200 398 CDD Transaldolase_TalAB 63 389 IPR004730 GO:0004801|GO:0005737|GO:0006098
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03200 Trre-Chr15 30135239 30143864 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03200 K00616 - gmx:100789900 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03200 15 30135239 30143864 Trre15g03200 15 30135239 30143864 ECH