Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03191 ATGGCTTCATTTAGAGCTTTCTTCTTCTTTCTCATCAACATTTTCTTCCTTCTCACACTCTCTTCTGCAGAAGATGCATTAGTTCCCTATACGTTTGAGATTTCCTACATCACTGCCTCTCCTCTAGGAGTACCCCAACAGGTCATTGCTATCAATGGTGAGTTTCCAGGTCCTACTATTAATGTAACAACAAACAACAATGTTGCTGTTAATGTCCATAACAAATTGGATGAGAATCTTCTCATTCATTGGTCTGGTGTTCAGCAAAGGAGGACTTCATGGCAAGATGGTGTTCTTGGAACAAATTGTCCTATTCCTCCAAAATGGAACTGGACTTATCAGTTTCAAGTGAAGGATCAGATTGGAAGTTTTTTCTACTTTCCTTCACTTAATTTTCAAAGAGCAGCTGGTGGATTTGGTGGTTTCATCATAAACAACCGACCCGTCATTTCTGTTCCTTTTGATACTCCACAAGGAGACATTGTTGTTTTTATTGGTGATTGGTATACGCGTAATCACACGGATTTGAGAAAGGATCTGGATGATGGAAAAGATCTTGGCATGCCAAATGGAGTTCTCATCAATGGAAAAGGACCTTATAGATATAATGACACACTTGTTCCTGATGGCATTGATTTTGAACAAATTGATGTTAAACCTGGAAAAACTTACCGAATTCGGGTACATAATGTTGGAATATCAACAAGTCTGAATTTCAGGATTCAGAACCATAACTTACTTCTAGCAGAAACTGAGGGGTCATATACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTTCTGGTAACCATGGATCAGAATGCAAGTTCAGATTACTACATTGTAGCAAGTGCTAGGTTTGTGAATGAATCGCGTTGGCAGAGAGTTACCGGAGTTGGTATCTTGCACTATACCAATTCCAAGGGGAAAGCAAAAGGTCATTTACCACCGGGTCCAGATGATCAATTTGACAAAACTTTCTCAATGAACCAAGCAAGATCCATCAGATGGAACGTATCAGCAAGTGGTGCTCGTCCAAATCCACAAGGATCTTTCAGATACGGTTCAATCAATGTGACAGAGATTTATGTTCTAAAAAATAAGCCACTAGTGAAAATTGGTGGGAAGCGGCGAGCAACACTTAGTGGAATCTCTTATACCAATCCTGCCACTCCACTCAGACTTGCTGACAAATATAAAGTAAAGGGAGTATACAAGCTTGATTTTCCCACAAAGCCTATAACCGGACCTCCACGGGTAGAAACTTCAGTAATCAATGGAAGTTTTAGAGGGTTTATGGAAATTATACTGCAGAACAATGACACCAAGATGCATACCTATCACTTGAATGGATATGCATTTTTTGTAGTAGGGATGGACTTTGGTGATTGGTCTGAGAACAGCAGGGGGACATATAACAAGTGGGATGGAATAGCTCGTACTACAGCACAGGTCTATCCTGGTGCATGGACAGCAGTTTTGGTCTCCCTCGACAACGTTGGAATTTGGAATCTAAGAACTGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATACATCAGGGTTGTCAATCCAGAGCCTACAAACAAGACTGAGCTTCCAATGCCAGACAATGCCCTTTTCTGCGGCTCCCTTCAACATTTGCAAAAGCCTCAAAAAATTATCTCGGACGCTTCAATCAATGGAAATGGGCTGAAACTGATATTCACTCTGCTTAATGTTCTGAGGCTCCCAGTTTAA 1764 0.4042 MASFRAFFFFLINIFFLLTLSSAEDALVPYTFEISYITASPLGVPQQVIAINGEFPGPTINVTTNNNVAVNVHNKLDENLLIHWSGVQQRRTSWQDGVLGTNCPIPPKWNWTYQFQVKDQIGSFFYFPSLNFQRAAGGFGGFIINNRPVISVPFDTPQGDIVVFIGDWYTRNHTDLRKDLDDGKDLGMPNGVLINGKGPYRYNDTLVPDGIDFEQIDVKPGKTYRIRVHNVGISTSLNFRIQNHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQRVTGVGILHYTNSKGKAKGHLPPGPDDQFDKTFSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPLVKIGGKRRATLSGISYTNPATPLRLADKYKVKGVYKLDFPTKPITGPPRVETSVINGSFRGFMEIILQNNDTKMHTYHLNGYAFFVVGMDFGDWSENSRGTYNKWDGIARTTAQVYPGAWTAVLVSLDNVGIWNLRTENLDSWYLGQETYIRVVNPEPTNKTELPMPDNALFCGSLQHLQKPQKIISDASINGNGLKLIFTLLNVLRLPV 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03191 587 FunFam Monocopper oxidase-like protein 158 351 - -
Trre15g03191 587 PANTHER MULTI-COPPER OXIDASE 46 534 IPR045087 -
Trre15g03191 587 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Trre15g03191 587 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Trre15g03191 587 Gene3D - 158 351 IPR008972 -
Trre15g03191 587 Pfam Multicopper oxidase 161 313 IPR001117 -
Trre15g03191 587 Gene3D - 19 146 IPR008972 -
Trre15g03191 587 SUPERFAMILY Cupredoxins 380 552 IPR008972 -
Trre15g03191 587 Pfam Multicopper oxidase 400 533 IPR011706 GO:0005507|GO:0016491
Trre15g03191 587 Gene3D - 363 561 IPR008972 -
Trre15g03191 587 FunFam Monocopper oxidase-like protein SKU5 22 146 - -
Trre15g03191 587 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Trre15g03191 587 FunFam Monocopper oxidase-like protein 363 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03191 Trre-Chr15 29837150 29840593 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03191 - - gmx:100788318 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g03191 15 29837150 29840593 Trre15g03191 15 29837150 29840593 ECH